Gene Svir_19200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_19200 
Symbol 
ID8387247 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2044825 
End bp2045307 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content68% 
IMG OID644975986 
Productacetyltransferase, ribosomal protein N-acetylase 
Protein accessionYP_003133768 
Protein GI257055936 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.208293 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.732719 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACGACG TTCCGCTGGC GATGGAGCTC GGTGAGGACC CGTACGTTCC GTTGATCGGT 
TCCTTGCCCG CCCGTCCGAC TCCGTGTCAG GCGTGGGAGT GGGTGGAACG ACAACGGCGC
CGCTATGACG AGGGGGTGGG GTTCTCCTTC GTGGTGGTCG AGCGGGCCAC GGACACGGCG
GTCGGCACGA TCGGTCTGTG GTTACGGGAG TTGTCCTATG GTCGTGCTTC GGTCGGCTAT
TCGGTGGCGC CCCGTCACCG GGGTCGCGGT ATCGCCGGCG GGGCGCTTGG GGCGGTGACC
GCGTTCGCGT GGACCATTCC GGGGCTGCAT CGCATACAGG CCTACATCGA GCCGTGGAAC
CACGCCTCCC GCCGGGCGGC GGAGAACGCC GGTTACCGGC GGGAGGGCTT GTTACGTGGT
CATCAGCGGA TCGGTGGCAC GTACCGGGAC ATGCTGCTGT ATGCGACGGT GCGTTCGCGG
TGA
 
Protein sequence
MDDVPLAMEL GEDPYVPLIG SLPARPTPCQ AWEWVERQRR RYDEGVGFSF VVVERATDTA 
VGTIGLWLRE LSYGRASVGY SVAPRHRGRG IAGGALGAVT AFAWTIPGLH RIQAYIEPWN
HASRRAAENA GYRREGLLRG HQRIGGTYRD MLLYATVRSR