Gene Svir_19040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_19040 
Symbol 
ID8387231 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2023094 
End bp2023516 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content66% 
IMG OID644975971 
ProductATP:cob(I)alamin adenosyltransferase 
Protein accessionYP_003133753 
Protein GI257055921 
COG category[R] General function prediction only 
COG ID[COG3193] Uncharacterized protein, possibly involved in utilization of glycolate and propanediol 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.631262 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGAACC TGCCGTCCGT GTCGCTCGAG GAAGCACGCC AGATCATCAC AGGAGGCGAA 
CGCAAAGCGC AGGAGATCGG ACAGCCGGTC AACATCGCGG TGGTCGACGC AGGCGGCAAT
CTGGTCGCGC ACGCGCGGAT GGACGGGGCC TGGATCGGTA GCGTGGACAT CTCCATCAAC
AAGGCCTTCA CCGCCCGTGC CTTCGACATC TCGACCGGTG AACTGGCCGG CAACGCACAA
CCCGGTGCGC AGTTCTTCGG CATCCACGTC TCCAACAAGG GACGGGTCAT GGTCTTCGCG
GGTGGGATAC CGCTGCAACA CGAGGGCCAG GTCGTCGGCG CCGTCGGGGT CAGCGGTGGC
ACCGGTGAAC AGGACCAGGC CATCGCCGAG GCCGCGGTGG CCGCGTTCCG ACCCAGCCGG
TAA
 
Protein sequence
MRNLPSVSLE EARQIITGGE RKAQEIGQPV NIAVVDAGGN LVAHARMDGA WIGSVDISIN 
KAFTARAFDI STGELAGNAQ PGAQFFGIHV SNKGRVMVFA GGIPLQHEGQ VVGAVGVSGG
TGEQDQAIAE AAVAAFRPSR