Gene Svir_18960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_18960 
Symbol 
ID8387223 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2015306 
End bp2015851 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content69% 
IMG OID644975963 
Producttranscriptional regulator 
Protein accessionYP_003133745 
Protein GI257055913 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.0870752 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.777873 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGAAG AGCTCGAGAT CGACGTCGCC GACCTGGCCT TCGAGTCGTT CGCCGCCTAT 
GCGCACGAAC GGACGGGGGC CCTGCTAGAC GGCGTCGATC TCGAGGCGGC GCGCCTCATC
CTCACCCTGC ACCGTGCCGC GAGCACCGTC GTCTACGACC TGGAGTCCAC CGTGCACCGG
CCGGCCGGGT GGAGCTGGTC CGGTTTCCGG TTGCTCTACG TCCTGTGGAT CGCCGGTCCG
CTGGAGGCCC GTCACGCCGC CCGGCTCGCC GGGTTGAGCC GACAGAGTGC CTCCACGCTC
TCCAAGACGC TCGAGCGCGA GGGGTTGTTG AGGCGTATCC CCTCGGCGGA GGACCGTCGG
CTCATCTCGT ACGACCTCAC CCCGCAGGGC AGGGCCCGCG TCGACGAGGT GTACCTCGAG
CACAACGCCC GTGAGCGGTT GTGGGCCGAA GTCCTGACGG AGGAGGAGCG CAGCACGGTC
ATCACGGCAC TGAGCAAGTT GCTGGACGCG GCTGAACGGC TCGACGTGCG CCGCCGCAAC
GACTGA
 
Protein sequence
MTEELEIDVA DLAFESFAAY AHERTGALLD GVDLEAARLI LTLHRAASTV VYDLESTVHR 
PAGWSWSGFR LLYVLWIAGP LEARHAARLA GLSRQSASTL SKTLEREGLL RRIPSAEDRR
LISYDLTPQG RARVDEVYLE HNARERLWAE VLTEEERSTV ITALSKLLDA AERLDVRRRN
D