Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_18960 |
Symbol | |
ID | 8387223 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 2015306 |
End bp | 2015851 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644975963 |
Product | transcriptional regulator |
Protein accession | YP_003133745 |
Protein GI | 257055913 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.0870752 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.777873 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGAAG AGCTCGAGAT CGACGTCGCC GACCTGGCCT TCGAGTCGTT CGCCGCCTAT GCGCACGAAC GGACGGGGGC CCTGCTAGAC GGCGTCGATC TCGAGGCGGC GCGCCTCATC CTCACCCTGC ACCGTGCCGC GAGCACCGTC GTCTACGACC TGGAGTCCAC CGTGCACCGG CCGGCCGGGT GGAGCTGGTC CGGTTTCCGG TTGCTCTACG TCCTGTGGAT CGCCGGTCCG CTGGAGGCCC GTCACGCCGC CCGGCTCGCC GGGTTGAGCC GACAGAGTGC CTCCACGCTC TCCAAGACGC TCGAGCGCGA GGGGTTGTTG AGGCGTATCC CCTCGGCGGA GGACCGTCGG CTCATCTCGT ACGACCTCAC CCCGCAGGGC AGGGCCCGCG TCGACGAGGT GTACCTCGAG CACAACGCCC GTGAGCGGTT GTGGGCCGAA GTCCTGACGG AGGAGGAGCG CAGCACGGTC ATCACGGCAC TGAGCAAGTT GCTGGACGCG GCTGAACGGC TCGACGTGCG CCGCCGCAAC GACTGA
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Protein sequence | MTEELEIDVA DLAFESFAAY AHERTGALLD GVDLEAARLI LTLHRAASTV VYDLESTVHR PAGWSWSGFR LLYVLWIAGP LEARHAARLA GLSRQSASTL SKTLEREGLL RRIPSAEDRR LISYDLTPQG RARVDEVYLE HNARERLWAE VLTEEERSTV ITALSKLLDA AERLDVRRRN D
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