Gene Svir_18950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_18950 
Symbol 
ID8387222 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2014083 
End bp2015270 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content67% 
IMG OID644975962 
Productacetyl-CoA acetyltransferase 
Protein accessionYP_003133744 
Protein GI257055912 
COG category[I] Lipid transport and metabolism 
COG ID[COG0183] Acetyl-CoA acetyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0500553 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.490702 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTGG CGGAACGGTT CGGTACCGAC GTCTTCATCT CCGGCTGGGG GCACACGAAG 
TTCGGCTCGT TGCCCGACGA GACTTTGGAA TCGCTGGTCG TCCGGGTCGC GGGCGAGGCG
ATCACCTCGG CCGGTATCGA TCCCGGGCAG GTCGACGAGA TCTGGTTCGG TCAGTTCAAC
TCCGGGCTGT GGCCGCTCGG TTTCGCTTCC TCGTTGGCCT TGCAGGTCTC GGACGAGCTG
TTCCGGGTCC CGGCCACACG GGTGGAGAAC GCGTGTGCCT CCGGCTCAGC TGCGATCCAC
AGTGGATTGA GGTCGTTGCT CGCCGGGACC GCCCGCACCG TGTTGGTGAT CGGTGCGGAG
AAGATGACCC ACGCACCGGC CGAACAGGTG GGGGCCGCTT TGCTGGGGGC CGACTACGAG
TTGGCCGGAA GCGAGTCGAG GACCGGTTTC GCGGGACTGT TCGCCCGCGT CGCCGAGGCG
TACCGACAGC GGTACGGCGA GATCAACGAC GCTCTCGGCG CGATCGCGGC GAAGAACCAC
GCCAACGGGA TGGCCAACCC ACTGGCGCAC CTGCGTAAAC AGTTCACCCC CGAGTTCTGC
TCCACGACGT CGGAGAAGAA CCCGATGGTC GCCGAACCGT TGCGGCGTAC CGACTGTTCG
CCCATCTCCG ACGGGGCCGC GGCGCTGGTG CTCACCACGC AACCGAGCAC CTCGGCGGCG
CAGAGCCCGG TCCGCCTCCT CGGTTTCGGC CAGGCCAACG ACTTCATGCC CGCGAACAAG
CGGGACCCGG TGGAGTTCGC CGGTAGCGTC GCGGCCTGGG AACGGGCCCG GAAGATGGCG
GGGGTCGGGC TCGACGACCT CGATCTGATC GAGCTGCACG ACTGCTTCAC CATCGCCGAG
TTGGTGATGT ACGAGGTCCT CGGTCTCGCT GAACGGGGCA AGGGGCGACA GGTGTTGGAG
GACGGCACCG TCTTCCGGGA CGGGAAGCTG CCGGTCAACC TCTCGGGCGG CCTGAAGTCG
AAGGGGCATC CGGTCGGTGC CACCGGTGTC TCGCAGCACG TCATGGCCGC CATGCAACTG
TCCGGGACCG CGGGTGAGTT GCAGTTGCCG GGTGCTCGTC GTGCCGCGGT GCACAACATG
GGTGGCCTGG CGGTGGCCAA CTACGTGAGT GTCCTGGAGG CGGTCTGA
 
Protein sequence
MTLAERFGTD VFISGWGHTK FGSLPDETLE SLVVRVAGEA ITSAGIDPGQ VDEIWFGQFN 
SGLWPLGFAS SLALQVSDEL FRVPATRVEN ACASGSAAIH SGLRSLLAGT ARTVLVIGAE
KMTHAPAEQV GAALLGADYE LAGSESRTGF AGLFARVAEA YRQRYGEIND ALGAIAAKNH
ANGMANPLAH LRKQFTPEFC STTSEKNPMV AEPLRRTDCS PISDGAAALV LTTQPSTSAA
QSPVRLLGFG QANDFMPANK RDPVEFAGSV AAWERARKMA GVGLDDLDLI ELHDCFTIAE
LVMYEVLGLA ERGKGRQVLE DGTVFRDGKL PVNLSGGLKS KGHPVGATGV SQHVMAAMQL
SGTAGELQLP GARRAAVHNM GGLAVANYVS VLEAV