| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_18870 |
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| Symbol | |
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| ID | 8387214 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 2005144 |
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| End bp | 2006517 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644975954 |
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| Product | L-serine ammonia-lyase |
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| Protein accession | YP_003133736 |
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| Protein GI | 257055904 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1760] L-serine deaminase |
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| TIGRFAM ID | [TIGR00720] L-serine dehydratase, iron-sulfur-dependent, single chain form |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.00891964 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATCT CCGTGTTCGA CCTGTTCAAG GTGGGAATAG GGCCTTCAAG TTCACACACC
GTCGGCCCGA TGCGGGCCGC GTACATGTTC GTCAATCGAC TGAACGGCTC CGGAAGGCTC
GGTCGCACGG CACGGCTCCG GTGCGAGCTG TTCGGCTCAT TGGGGGCGAC CGGACACGGT
CACGGCAGTG TCAAAGCCGT GGTGCTCGGG TTGTGCGGGG AACAGCCCCA CCTGGTCGAT
CCGGTGGCGG CCGATCCGAC GGTGGCCACG GTGCGGGCAG CGCGACGGAT CAGTCTCGGC
GGAAAACACG AGATCGATTT CCACGTCGAC GACGATGTGA TCCTGCATCG GCGAAAACGG
CTCGATTTCC ACAGCAACGG CATGGTCTTC ACCGCCTACG ACGCCGAGGG GAGCGAAGTC
GACCGTCGCG AGTACTACTC GGTGGGCGGG GGTTTCGTCG TGGACGAGGA CGAAGCCGGG
CATCCCGTCT CGGTGGAGGA CCCCACCCCT GTCCGCTATC CGTTCACCAC CGGTGAGGAG
CTGTTGAGGC TGACTCAGGA CACCGGACTG CGGGTCAGCG ACATCATGCT CGCCAACGAG
ACGGCCTGGC GCGGGGAGAC GGAGATCAGG GCCGGGCTGC TGCACATCTG GTCGGTGATG
CGCGAATGCG TCGAGCGTGG CACGCGCACC GAGGGGACGC TTCCCGGGGG GCTCAGGGTC
CGACGTCGGG CGGCCGCCCT GCGACGCCGG CTTGAGTCTG ATGTGGATGA TGCAGACCCC
TTGCGGGCCA TGGAATGGGT CACCTTGTAC GCACTCGCGG TGAACGAGGA GAACGCGGCG
GGCGGGCGGG TGGTCACCGC GCCGACCAAC GGCGCCGCCG GGATCGTGCC CGCCGTGTTG
CACTACTGCG CCCGTTTCCT GCCCCGCTTC GGCGACGACC ACGTCGTCCG GTTCCTCCTC
ACCGCAGGCG CGATCGGCCT GCTGTTCAAG CGGAACGCCT CCATCTCCGG TGCCGAGGTC
GGTTGTCAGG GTGAGGTGGG CTCGGCCTGC TCCATGGCCG CGGGGGGACT CGCCGAGCTC
CTCGGAGGGA CTCCCGAACA GGTGGAGAAC GCCGCCGAGA TCGGCCTCGA ACACAACCTG
GGACTGACCT GCGACCCGGT CGGCGGACTC GTGCAGATCC CCTGCATCGA GCGCAACGCG
ATAGCGGCGA TCAAAGCCAT CACGGCGGCC CGCATGGCGG TCCGTGGTGA CGGCGTCCAC
CACGTGTCGC TGGACAAAGC GATCAAGACC ATGCGGGAAA CCGGCGCGGA CATGAAGGAC
AAGTACAAGG AGACCGCCCG CGGCGGGTTG GCTCTCAACA TCGTCGAATG CTGA
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| Protein sequence | MTISVFDLFK VGIGPSSSHT VGPMRAAYMF VNRLNGSGRL GRTARLRCEL FGSLGATGHG
HGSVKAVVLG LCGEQPHLVD PVAADPTVAT VRAARRISLG GKHEIDFHVD DDVILHRRKR
LDFHSNGMVF TAYDAEGSEV DRREYYSVGG GFVVDEDEAG HPVSVEDPTP VRYPFTTGEE
LLRLTQDTGL RVSDIMLANE TAWRGETEIR AGLLHIWSVM RECVERGTRT EGTLPGGLRV
RRRAAALRRR LESDVDDADP LRAMEWVTLY ALAVNEENAA GGRVVTAPTN GAAGIVPAVL
HYCARFLPRF GDDHVVRFLL TAGAIGLLFK RNASISGAEV GCQGEVGSAC SMAAGGLAEL
LGGTPEQVEN AAEIGLEHNL GLTCDPVGGL VQIPCIERNA IAAIKAITAA RMAVRGDGVH
HVSLDKAIKT MRETGADMKD KYKETARGGL ALNIVEC
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