| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_18850 |
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| Symbol | |
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| ID | 8387212 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 2001755 |
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| End bp | 2004214 |
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| Gene Length | 2460 bp |
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| Protein Length | 819 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644975952 |
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| Product | glycine cleavage system T protein (aminomethyltransferase) |
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| Protein accession | YP_003133734 |
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| Protein GI | 257055902 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.303857 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACGA CTCCCCGCGT TGTCATCATC GGAGCCGGGA TCGTCGGCAC GAACCTGGCC
GACGAACTCA CCGAACGTGG TTGGGACCGG GTCACCGTCG TCGACCAGGG ACCGTTGCCG
CTCACCGGTG GTTCCACCTC GCACGCCCCC GGGCTCGTCT TCCAGACGAA CGCCTCGAAA
GCGATGACCG AATTCGCCAG CTACACCGTG GACAAACTGC TCAGCCTCGA CGTCGACGGT
GCCTGGTGCT TCAACCAGGT GGGTGGCCTG GAGATCGCGA CGACCCCGGA GCGACTGGCC
GACCTGTACC GCAAACAGGG CTGGGCCTTA TCCTGGGGCG TGCCGGCCGA AGTGGTCGAC
CCCGACAGGT GTGTCGAGTT GTATCCCCTG CTCGACAAGG AGAGGGTGCT CGGTGGGCTG
CACACACCCA CGGACGGCCT GGCCAAGGCG GCCCGCGCGG TGGTGGCGCT GACACGTCGC
GCCGAGTCGC GAGGCGCGGT GTTCCGCGGT CGCACCCGTG TCACCGAGGT GCTGCAGCAC
GGTGGTCGGG TGACCGGGGT GCGTACCGCC GACGGTGAGG ACATCCCCGC CGACATCGTG
GTGTCCTGCG CCGGATTCTG GGGACGGGAG CTCGGCGAGC TGGTCGGCAT GTCCGTGCCA
CTGTTGCCGT TGGCGCACCA ATACGTCCGC ACCACACCGT TGACCGAGCT CACCGGTCGC
AACGACGAGT TCATCGAGGC ACGGCTGCCG ATCCTGCGGC ATCAGGACCA CGACCTGTAC
TACCGCGAGC ACAACGATCG CCTCGGCATC GGTACCTATG CCCACCGGCC GATGCCGGCC
CGGCTGGCGG ACCTGCCCGA GGTCGACGAA CGGACCATGC CCTCGATGCT GCCGTTCACC
GAGGAGGACT TCGCGCCCTC GTGGGAACAC AGCAAGAGGT TGTTGCCCGC ACTGCGGGAC
GCCAAGGTCG ACACCGGCTT CAACGGGGTC TTCTCGTTCA CCCCCGACGG CGGCCCACTG
ATCGGGGAGT CCCCCGACGT GGCCGGATTC TGGATCGCCG AGGCCGTGTG GGTCACCCAC
TCCGCCGGGG TGGCGAAATC GGTCGCGCAA CTGCTCGTCG ACGGCCACAG CGAGATCAGC
CTGCACGGCT GCGACGTCCA CCGCTTCGAG GAGGTCCAGA CGAGCGACGC CTACGTGGAG
GAGACCGCGC AACGTAACTT CGTGGAGATC TACGACGTGC TGCACCCGTT GCAGCCCAAG
TTGTCCCCCC GTCAGTTGCG GGTCAGCCCG TTCTATGCGC GGCAGCGGGA GCTGGGCGCG
TACTTCCTGG AGGCGCAGGC GTGGGAGCGG CCGCACTGGT ACGAGGTCAA CGCCCACCTG
GTCAAGGACC TACCGCTGGA ATGGCAACCA CCGTCCCGGG ACGCGTGGTC GGCGATGTTC
CACTCACCGA TCGCCGCGGT GGAGGCGTGG AAGACCCGCA CCGCGGTCGC GCTGTACGAC
ATGACGCCGC TCAAGCGGAT CGAGGTCTCC GGGCCCGGGG CGTTGGGACT GCTGCAGCGA
CTGACCACCG GCAGGATGGA CAGGTCCGTC GGTTCGGTGA CCTACACCCT GATGCTCGAC
GAGGCGGGTG GGATCCGTTC GGATGTGACC GTGGCCCGGC TCGGTGAGGA GCTGTTCCAG
GTCGGCGCCA ACGGGAACCT GGATCTGGAC TACCTGTTGC GGCAGGCACG TGACGAGCCC
GGTGTGCAGG TCCGCGACAT CACCGGCGGC ACCTGCTGCA TCGGTGTGTG GGGTCCGCTG
GCCCGGGATC TGGTGCAGCC GCTGAGCGGT GACGATTTCT CCAACGAGGC GCTGAAGTAC
TTCCGGTTAC GTCGGGCCCA CATCGGCGGT ATCCCGGTGA TCGCGATGCG ACTGTCCTAT
GTGGGTGAAC TCGGCTGGGA GATCTACACC AGCGCCGAGT ACGGAATGCG ACTGTGGGAC
GTGCTGTGGG AGGCCGGACG GCCACTCGGG GCCATCGCCG CCGGGCGGGC GGCCTTCAAC
AGCCTGCGAC TGGAGAAGGG GTACCGGTCG TGGGGCAACG ACATGACCAC CGAGCACAAC
CCCTATGAAG CCGGTCTCGG TTTCGCGGTG AACAAGAAGA AGACGGGATA CGTCGGCTAC
GAGGCGATCG CGGGATTGGA GAACGAGACC CCGGCGCGGC GGTTGACCTG TCTCACCGTG
GACGACGGGC GAAGCGTGGT CATGGGCAGT GAACCGGTGT TCTTGGACGG GGACGCGGTC
GGCTATGTCA CCTCGGCCGC GTTCGGATAC ACGATCGGCA AACCGATCGC CTACGCCTGG
CTGCCGTCGT CGGCGGTGGA GGGCACGTCG GTGGAGATCC AGTACTTCGA GCGCAGGGTA
CGCGCCACCG TCACCGCCGA GCCGCTGGTC GATCCGGACA TGACCCGCAT CCGCCGGTGA
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| Protein sequence | MSTTPRVVII GAGIVGTNLA DELTERGWDR VTVVDQGPLP LTGGSTSHAP GLVFQTNASK
AMTEFASYTV DKLLSLDVDG AWCFNQVGGL EIATTPERLA DLYRKQGWAL SWGVPAEVVD
PDRCVELYPL LDKERVLGGL HTPTDGLAKA ARAVVALTRR AESRGAVFRG RTRVTEVLQH
GGRVTGVRTA DGEDIPADIV VSCAGFWGRE LGELVGMSVP LLPLAHQYVR TTPLTELTGR
NDEFIEARLP ILRHQDHDLY YREHNDRLGI GTYAHRPMPA RLADLPEVDE RTMPSMLPFT
EEDFAPSWEH SKRLLPALRD AKVDTGFNGV FSFTPDGGPL IGESPDVAGF WIAEAVWVTH
SAGVAKSVAQ LLVDGHSEIS LHGCDVHRFE EVQTSDAYVE ETAQRNFVEI YDVLHPLQPK
LSPRQLRVSP FYARQRELGA YFLEAQAWER PHWYEVNAHL VKDLPLEWQP PSRDAWSAMF
HSPIAAVEAW KTRTAVALYD MTPLKRIEVS GPGALGLLQR LTTGRMDRSV GSVTYTLMLD
EAGGIRSDVT VARLGEELFQ VGANGNLDLD YLLRQARDEP GVQVRDITGG TCCIGVWGPL
ARDLVQPLSG DDFSNEALKY FRLRRAHIGG IPVIAMRLSY VGELGWEIYT SAEYGMRLWD
VLWEAGRPLG AIAAGRAAFN SLRLEKGYRS WGNDMTTEHN PYEAGLGFAV NKKKTGYVGY
EAIAGLENET PARRLTCLTV DDGRSVVMGS EPVFLDGDAV GYVTSAAFGY TIGKPIAYAW
LPSSAVEGTS VEIQYFERRV RATVTAEPLV DPDMTRIRR
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