| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_18830 |
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| Symbol | |
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| ID | 8387210 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 1998355 |
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| End bp | 2001132 |
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| Gene Length | 2778 bp |
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| Protein Length | 925 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644975950 |
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| Product | glycine cleavage system T protein (aminomethyltransferase) |
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| Protein accession | YP_003133732 |
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| Protein GI | 257055900 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase) |
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| TIGRFAM ID | [TIGR01372] sarcosine oxidase, alpha subunit family, heterotetrameric form |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCGGG TCCACGGGTA CGGCCGCATC GACCGCAGCC GCACCCTCAC CTTCACCTTC
AACGGACGCA CCTACACCGG ACACCCCGGT GACACACTCG CGTCGGCGCT GCTGGCCAAC
GGTGTCCACC GGCTCGGGAC CAGCGTCAAG TTCGGCCGCC CCCGGGGCAT CACCGCCGCC
TGGACGGAGG ACGCGACCGC GCTGGTGCAG ATCGAACGAC CGTTTCCCGA ACCGATGCTG
CAGGCCACCA CCGTCGAACT CGTCGACGGC CTGGTGGCCC GCGGAGTCAA CGGGCAGGGC
ACGCTCGCCG ACGTCCCGGA CCCGGCCCGT TACGACCACC GACACGTGCA CACCGACACG
TTGGTGGTCG GCGCAGGCCC GGCCGGATTG CTCGCCGCCC TCGCCGCGGC CCGCGCGGGC
GAGGACGTGG TGCTGGTCGA CGATCGCCCC GCCGCGGGTG GGAGCCTGAC CGGCACCGAG
CGGATCGACG GTCGCCCCGC GCTCGAGTTC GTCGACGACG TCGTCGACGA ACTGGCGCGG
CTCGGCGTCC AGCACCTCCA GCGCACCACC GCGTTCGGAC ACTACGACGA CGGATTCGTG
CTCGCCCTGG AGCGGCGCAC CGACCACCTC GGCGCCGCCG CACCACCGAA CCGCAGCCGG
CAACGGGTGC ACCGGATCCG CGCGCTGAAG ACCGTGCTCG CCACCGGTGC GCAGGAACGG
CCGATCGTGT TCTCCGACAA CGACCGGCCC GGGATCATGC TCGCCTCCTC CGCGCGGGAC
TACCTGCACC GGTACGGCGT CCTCGCCGGG GACGAGATCA TCGTGTTCAC CGCGGACGAC
GCCGCCTACG CCGCCGCGAT CGACCTGGCC GGTGCCGGAG CGCGCGTCAC CGTCCTCGAC
GCGCGGGAAC ATCCACCCCT GGAATGGGTG AGTCGGGCGA CTGCCGTCGG GATCCCCGTG
CATCCGGCGA CCGTGGTCAC CGGAACCGAA GGCGAACAAC GGGTACGGAC GGTGCTCGCC
CGAACCGCCG ACGGCAGCGT GCGGTTCCCC GCGAACCTGC TGCTGGTCTC CGGTGGCTGG
AACCCGGTCA CGCACCTGTT CAGCCACATC CGGGGAACAC TGACCTACGA TGCGTCGCTC
GGTTCGTTCC GCCCTTGCGG GTCACTGCCC GGTGTCACCG TGATCGGCGC GGCGGGTGGG
ACGCTGGAGC TGACCGAGGT GCTGCGCGAG GGCGGTGGCC AGGACGCGCC GCACGCCGAC
CCGGAACCGC CTCGCACGCC GACCCGGGTC ATGTGGCGAA CCGAAGGCGA TCCGGACCGA
CAGTTCGTCG ACCTCCAACG CGATGCCACG GTGACCGACA TCAGTCGTGC GGTGGGTGCC
GGGCTGCGGT CGATGGAACA CGTCAAGCGC TACACCACGA TCGGTACCGC GCACGACCAG
GGCAAAACCT CCGGGGTGGT CGCCTCGGGC ATCACCGCGG AGCTGCTGGG CGTGCCGATC
GAGAAGTTGG GCACCACCAC GTTCCGCCCG CCGTACACCC CGGTCGCCTT CGCCGCCCTG
GCCGGTCGCG CGCGAGGGCG CCTGTTCGAC CCCGTGCGAA CCACGATGTT GCACGATTGG
CACGTCGAGG CGGGCGCGGT GTTCGAGGAC GTCGGACAGT GGAAACGCCC TCGCTACTAT
CCGCGGCCCG GTGAGGACAT GGACGCCGCC GTACTCCGCG AATGCGCGGC CGTCCGATCG
GGTGTCGGCA TCCTCGACGG GTCCACATTG GGCAAGATCG ACGTGCAGGG CCCGGACTCC
GGAGTACTGC TCGACCGGCT CTACACCAAC ATGATGAGCA CGTTGCGGGT CGGTCGGGTC
CGTTACGGGG TCATGTGCGG CAACGACGGC ATGGTGCTCG ATGACGGAAC CGTGCTGCGG
CTCGACGAGA ACCGCTATCT CATCACCACG ACCACCGGCG GTGCCGCCAC GGTGTTGGAC
TGGATGGAGG AGTGGCTCCA GACGGAGTGG CCGGAATTGC GGGTGCACCT GACGTCGGTC
ACCGAGCAAT GGTCGGTGTT CCCGGTGGTC GGCCCGCGTT CGCGCGACGT GATCGGCGCG
GTGTTCCCGG ACCTCGACGT CAGCAACGAG GCGTTCCCCT TCATGACGTG GCGGGACACG
ACGCTCGACG ACATCCCGGT CCGCATCGCC CGGATCTCGT TCTCCGGTGA ACTGGCCTAC
GAGGTCAACG TCAATTCCTG GTACGCGCCG GCGCTGTGGC AACGCCTGCT CGCCGCGGGC
GAGAAGTACG GGATCACACC GTACGGCACC GAGACGATGC ACGTGCTGCG CGCGGAGAAG
GGCTATCCGA TCATCGGGCA GGACACCGAC GGCACGGTCA CCCCCCAGGA CCTGGGCATG
AGCTGGGTGG TGTCGAAGAA GAAGGACGAC TTCATCGGCA AACGCTCCTT CGCCCGGCCG
GAGAACAACA ACCCACAGCG CAAACAACTC GTCTCGCTGC TGCCCGTCGA CGGTCGGACG
AGATTGCCGG AGGGCTCCCA GATCGTCGAA CTGTGCGAGG ACGACAGGCT TCCCGAACCG
CCGGTGCCGA TGCTCGGACA CGTCACCTCC AGCTACTTCA GCGCCGAACT GGGCCGACCG
TTCGCGCTGG CGTTGGTGAA GAACGGTCGT GCCCGGATCG GTGAGGTGGT GCACGTGCCG
TACAACGGCA CCCTCGTGCG AGCCCAGATC GGCGAAACCG TGCTGGTCGA CCCGGAAGGA
GCGCGTCGCG ATGGCTGA
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| Protein sequence | MTRVHGYGRI DRSRTLTFTF NGRTYTGHPG DTLASALLAN GVHRLGTSVK FGRPRGITAA
WTEDATALVQ IERPFPEPML QATTVELVDG LVARGVNGQG TLADVPDPAR YDHRHVHTDT
LVVGAGPAGL LAALAAARAG EDVVLVDDRP AAGGSLTGTE RIDGRPALEF VDDVVDELAR
LGVQHLQRTT AFGHYDDGFV LALERRTDHL GAAAPPNRSR QRVHRIRALK TVLATGAQER
PIVFSDNDRP GIMLASSARD YLHRYGVLAG DEIIVFTADD AAYAAAIDLA GAGARVTVLD
AREHPPLEWV SRATAVGIPV HPATVVTGTE GEQRVRTVLA RTADGSVRFP ANLLLVSGGW
NPVTHLFSHI RGTLTYDASL GSFRPCGSLP GVTVIGAAGG TLELTEVLRE GGGQDAPHAD
PEPPRTPTRV MWRTEGDPDR QFVDLQRDAT VTDISRAVGA GLRSMEHVKR YTTIGTAHDQ
GKTSGVVASG ITAELLGVPI EKLGTTTFRP PYTPVAFAAL AGRARGRLFD PVRTTMLHDW
HVEAGAVFED VGQWKRPRYY PRPGEDMDAA VLRECAAVRS GVGILDGSTL GKIDVQGPDS
GVLLDRLYTN MMSTLRVGRV RYGVMCGNDG MVLDDGTVLR LDENRYLITT TTGGAATVLD
WMEEWLQTEW PELRVHLTSV TEQWSVFPVV GPRSRDVIGA VFPDLDVSNE AFPFMTWRDT
TLDDIPVRIA RISFSGELAY EVNVNSWYAP ALWQRLLAAG EKYGITPYGT ETMHVLRAEK
GYPIIGQDTD GTVTPQDLGM SWVVSKKKDD FIGKRSFARP ENNNPQRKQL VSLLPVDGRT
RLPEGSQIVE LCEDDRLPEP PVPMLGHVTS SYFSAELGRP FALALVKNGR ARIGEVVHVP
YNGTLVRAQI GETVLVDPEG ARRDG
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