| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_18810 |
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| Symbol | |
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| ID | 8387208 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 1996798 |
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| End bp | 1998036 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644975948 |
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| Product | sarcosine oxidase, beta subunit family, heterotetrameric form |
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| Protein accession | YP_003133730 |
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| Protein GI | 257055898 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | [TIGR01373] sarcosine oxidase, beta subunit family, heterotetrameric form |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCGG CGACGACACC ACCGGGAGCG GACCTGCCCG AACACCCGGA TTTCCTCTGG
CGTAACCCGG AACCGAAGAA GAACTACGAC GTGGTGATCG TCGGTGGCGG TGGACACGGC
CTGGCGACCG CTTACTACCT GGCGAAGAAC CACGGGATCA CCGACGTCGC GGTGTTGGAG
AGAGGCTGGC TCGCCGGCGG CAACATGGCC CGCAACACCA CGTTGATCCG GTCGAACTAC
CTCTGGGACG AATCCGCGAC GATCTACGAA CACTCCCTGA AACTGTGGGA GGGACTGGAA
GAGGAGCTGG ACTACCCGAT CCTGTTCTCC CAGCGCGGAG TGCTCAACCT GGCGCACACC
GAACAGGACG TCCGCGACTC GATCCGTCGC GTCGAGGCCA ACAAGCTCAA CGGCATCGAC
GCGGAATGGC TCGAACCGGA GGAAGTCGCC CGGGTCTGCC CGATCGTCAA CATCTCCGAG
GACATCCGCT ACCCCGTTCA AGGAGCGACC TACCAGCCTC GTGCGGGAAT CGCCAAGCAC
GACTACGTCG CCTGGGGATT CGCCCGCCGC ATCGATCAGG CGGGAATCGA CCTGATCCAG
GACTGTGAGG TCACCGGGTT CACCGTAATC GGCGACCGGG TGACCGGGGT GCGGACCACC
CGTGGCGACA TCGGCTGCGG CACCGTCGCA CTGTGCGCCG CGGGCCACAC CTCGGTGCTG
CTGGACAAGT TGGGCGTGCG CGCCCCGCTG CAATCCCATC CGCTCCAGGC GTTGGTCTCC
GAATTGTTGG AGCCGGTGCA CCCGACCATC GTCATGTCCA ACGCCGTACA CGTGTACGTC
TCCCAGGCGC ACAAGGGCGA GTTGGTGATG GGAGCGGGCA TAGACGCCTA CAACGGGTAC
GGGCAGCGAG GGTCGTTCCA CATCATCGAA CGACAGCTGG CCGCGGCCGT GGAACTGTTT
CCCGTCTTCG CCCGCGCCCA CCTGCTGCGT TCCTGGGCGG GCATCGTCGA CGTCACACCG
GATGCGAGCC CGATCATCGG ACACACCCCC TACGAGAACG TGTTCGTCAA CGCCGGATGG
GGGACCGGCG GATTCAAGGC GACACCGGGG ATCGGCTGGT GTTACGCGCA CACCATCGCG
CACGGCGAGC CGCATCCGTA CGTCGCACCG TTCAGCTTGG ACCGATTCAC CACCGGCGCA
CTCATCGACG AGCACGGCGC TGCGGCCGTG GCCCACTGA
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| Protein sequence | MSAATTPPGA DLPEHPDFLW RNPEPKKNYD VVIVGGGGHG LATAYYLAKN HGITDVAVLE
RGWLAGGNMA RNTTLIRSNY LWDESATIYE HSLKLWEGLE EELDYPILFS QRGVLNLAHT
EQDVRDSIRR VEANKLNGID AEWLEPEEVA RVCPIVNISE DIRYPVQGAT YQPRAGIAKH
DYVAWGFARR IDQAGIDLIQ DCEVTGFTVI GDRVTGVRTT RGDIGCGTVA LCAAGHTSVL
LDKLGVRAPL QSHPLQALVS ELLEPVHPTI VMSNAVHVYV SQAHKGELVM GAGIDAYNGY
GQRGSFHIIE RQLAAAVELF PVFARAHLLR SWAGIVDVTP DASPIIGHTP YENVFVNAGW
GTGGFKATPG IGWCYAHTIA HGEPHPYVAP FSLDRFTTGA LIDEHGAAAV AH
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