Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_18770 |
Symbol | |
ID | 8387204 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 1992453 |
End bp | 1993595 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644975944 |
Product | ring-hydroxylating dioxygenase, large terminal subunit |
Protein accession | YP_003133726 |
Protein GI | 257055894 |
COG category | [P] Inorganic ion transport and metabolism [R] General function prediction only |
COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.760818 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.333095 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGTTCCA CCGAAGTCCG TACCCAGCGG CTTGAGACCG GCACCAGCCT CATTCCGACC CTGCCCGGTT CGTACTACAC CGACCCTGAG ATCTTCGAAC GCGAGAAGAG CCGGATCTTC CAGCGCAATT GGTTCGCCGC GGCACGGAGT ACCGATCTGC CCGAACCGGG CTCCTTCCGC GCCGTCGACG TCGGCGGGGA GAGTGTGCTG ATCGTCCGGG GCCGGGACCG CAAGCTGCGG GCCTTCCTCA ACGTCTGTCG CCACCGCGGT GCCCGGTTGT GCATGGCGGA TTCCGGCTCC GTGCGGCGAT CCCTGCAATG CCCTTACCAC GCATGGACCT ACGGCCTCGA CGGTTCGCTC ATCGCGGCAC CGAACCTGAG TTCGATGAAC GACGTCAACC GCGACGAATA CGGCTTGGTC GGTGTCGCGC TGCGGGAATG GCTCGGAGCT GTCTGGGTGT GTCTGGCCGA GGAACCGCCG TCCTTCACCG ACACGGTGCA GGCCGCGGTC ACCGCTCGGC TGGGCGACGC CGGGATGATC GAGGAATGGG GTATCGACGA ACTGGTCGTC GGTCGCCGTA TCACCTACGA CGTCAAGGCG AACTGGAAGC TGATCGTCGA GAACTTCATG GAGTGCTACC ACTGCGCGAC GATCCACCCG GAGCTGACCG AGGTGCTGCC GGAGTTCGCC GAAGGCTACG CCGCCCAGTA CTTCGTCGGA CACGGCGCCG AATTCGGTGA GGAGATCGAG GGATTCACCG TCGACGGCCG ACCCGGTTTC GACCGGATCG ACGGTGTCGA CGACGAACAC GATCGCCGCT ACTACGCGAT CACCATCAAC CCCCAGGTGT TCATCAACCT GGTACCCGAC CACGTGATCT TCCACCGGAT GTACCCGAAG GCGGCGGACC GCACCGTCAT CGAATGCGAC TGGCTCTACA CCAAGGACGT CGTCGACAGC GGTGCCGATC TGAGTAAGTC GGTGGAGCTG TTCCACCGGG TCAACCAGCA GGACTTCGAC GCCTGCGAAC GCTGCCAACC GGCGATGTCG TCGAAGGCCT ACGTCGATGG CGGGGTGTTG GTGCCCAGTG AGCACCACAT CGGGGAGTTC CGTGACTGGG TCGTACGCGC GCTCGCGGAC TGA
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Protein sequence | MSSTEVRTQR LETGTSLIPT LPGSYYTDPE IFEREKSRIF QRNWFAAARS TDLPEPGSFR AVDVGGESVL IVRGRDRKLR AFLNVCRHRG ARLCMADSGS VRRSLQCPYH AWTYGLDGSL IAAPNLSSMN DVNRDEYGLV GVALREWLGA VWVCLAEEPP SFTDTVQAAV TARLGDAGMI EEWGIDELVV GRRITYDVKA NWKLIVENFM ECYHCATIHP ELTEVLPEFA EGYAAQYFVG HGAEFGEEIE GFTVDGRPGF DRIDGVDDEH DRRYYAITIN PQVFINLVPD HVIFHRMYPK AADRTVIECD WLYTKDVVDS GADLSKSVEL FHRVNQQDFD ACERCQPAMS SKAYVDGGVL VPSEHHIGEF RDWVVRALAD
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