Gene Svir_18720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_18720 
Symbol 
ID8387199 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1987658 
End bp1988266 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content68% 
IMG OID644975939 
Producthypothetical protein 
Protein accessionYP_003133721 
Protein GI257055889 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.533637 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.299782 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGTGTCCT TCGGGCCTTC CGGTTTCGCC GCCTATGCAC GGCTGCGGTT CGTTCCCGAT 
CCCGCGTACG AGGGGCAGCA GGAGGCCGAC GCCGACGCGG TCAACGACGA GGCCGAGCAA
CTGCGGATGG TGTTCGACGT GTTGGCCGAA CACACTCGCA CCCCGCGGGA TTGCTACTTC
TGTCTCTGGG AGGGCACCGG AGACATCGTC AGACCGGATT CCCCCGTCCC CGACGAAGAC
GAGGATGCCG CCGCGTATCC GGAGCTTCGA GCTCAACCGG CGCGCGTGCC GAAGCACGCT
GAGCCGCCTC GGCTGCCCGG GCCGCTCGTG AGCGTGCCGC ACCGTTCGTA CTACCTCTTT
CACGGGGCGC TGTCGGAGGC CGGAGCGTGG AGTTTCCCCG AAGGATGGCC TGACCAGCCG
CGGCTCGACA TCACCCACAT CGCGTTCGCG TGGCCCGCCG ACCACGCCTG GTGCGTGGCC
AACGACGTCG ACCCGCACTG GGCGGGAATC GGTGCCGACG CCGCTGTCAT CGACCGGCTC
GTCGCCGACC CCCGCCTCGA TGTGGTTCCG GCTGACCCCA CCGCTGAGCA ACCGGTGTAT
CTGTGGTGA
 
Protein sequence
MVSFGPSGFA AYARLRFVPD PAYEGQQEAD ADAVNDEAEQ LRMVFDVLAE HTRTPRDCYF 
CLWEGTGDIV RPDSPVPDED EDAAAYPELR AQPARVPKHA EPPRLPGPLV SVPHRSYYLF
HGALSEAGAW SFPEGWPDQP RLDITHIAFA WPADHAWCVA NDVDPHWAGI GADAAVIDRL
VADPRLDVVP ADPTAEQPVY LW