Gene Svir_18610 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_18610 
Symbol 
ID8387188 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1974660 
End bp1975496 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content71% 
IMG OID644975929 
Productcitrate lyase beta subunit 
Protein accessionYP_003133711 
Protein GI257055879 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2301] Citrate lyase beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCCCTC CCCACCGGAG TTGGCTCTAC GTCCCCGCCG ATCGTCCCGA CCGGGTCCGC 
AAGGCGCTCG CGAGCGAGGC CGACGCGGTG ATCCTCGACC TGGAGGACGC GGTGGCACCG
GCCAACAAGG ACGCCGCTCG CCGCACCGTG CTCGACACCC TCGCCGAGGG TCATGAAGTG
TACGTGCGCA TCAACGATCC AAACGGTCCA CACGGGGCCG AGGACGTGCG CGCGCTCGCC
GCCGCCGCAG CCGCCCCGGC CGGTGTGCGG ATTCCCAAGT GCGAGGACGT CGAGGAACTG
CGCCGCGTGG CCGATGAACT CGGTGTCCCG GTCCTTCCTG TGATCGAATC CGCGCTCGGT
GTGGAGAACG CCTGGGCGCT GGCCACCGCA CATCCGTTGG TCGCCGGGAT CTCGCTCGGT
GAGGCGGATC TGTCGGCGGA TCTGCGCGCC ACCGGCGACG AGGTGCTGGC CTGGCCGCGC
TCACGCATCG TCGTCGCCGC CCGCGCAGCC GGGTTGCCGA GTCCGGTGCA GAGCGTGTGG
ACGGCCGTGA AGGACCTCGA CGGGCTCCGC CGCGACACGC TCGCCGCCCG CCGCCGAGGT
TTCTTCGGAC GTTCGGTGAT CCACCCGGCG CAGATCCCCG TGGTGCACGA AGCCTGCGCA
CCCGACCCCG AGGAGACCGC ATGGGCCCGC TCGGTGCTGG ACCGGGTCAG CGAGAGCGGT
GACGCGGCCT GGATCGACCA CACAGGACGG TTCGTGGACA AGGCGATCGT GGAACGGGCG
CGCTGGCTCG TGGCGATCGC GGACGGCGCT CACGCCGAGA AAGGCCAGAA ACCATGA
 
Protein sequence
MIPPHRSWLY VPADRPDRVR KALASEADAV ILDLEDAVAP ANKDAARRTV LDTLAEGHEV 
YVRINDPNGP HGAEDVRALA AAAAAPAGVR IPKCEDVEEL RRVADELGVP VLPVIESALG
VENAWALATA HPLVAGISLG EADLSADLRA TGDEVLAWPR SRIVVAARAA GLPSPVQSVW
TAVKDLDGLR RDTLAARRRG FFGRSVIHPA QIPVVHEACA PDPEETAWAR SVLDRVSESG
DAAWIDHTGR FVDKAIVERA RWLVAIADGA HAEKGQKP