Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_18600 |
Symbol | |
ID | 8387187 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 1973842 |
End bp | 1974663 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644975928 |
Product | predicted metal-dependent hydrolase |
Protein accession | YP_003133710 |
Protein GI | 257055878 |
COG category | [R] General function prediction only |
COG ID | [COG1878] Predicted metal-dependent hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACGTA CACAAGATCC GCTACTTTCC GCCGTCGCCG GTGGGGTGCG GTTGTTCGAG CTGGGACAGC CCTTCTTCAC GGGGATGCCG TGCTCACCGA ACCATCCCGG GTTCCGGATG ACGTTGATCC GCAGACACGG GGACATGCTG CGCCCGGACG GCGGGTCCGC GGCCAACGAG ATCATCGTCA CGGGTGGTCA CGTGGGCACG CACATCGACG CGCTCTCCCA CGTCAGTCAC GACGGCAAGT TGCACGGCGA CGTCGATGCC GCGCAGGCAC AGCAGGGCGG CGTGTTCACC ACCCACGGGG CGGAGAACCT CCCCGGCCTC CTGCGACGCG GGGTGTTGCT GGACGTGGCC GCCGTCCACG GTGTCGCCAC ACTCGATGCG GGCTACGGCA TCACCGCGGC CGACCTGGAG GCCGCCGCGG AGTTGGCGGG CGCCGAACCG GGTGAGGGTG ACGTGGCGTT GGTACGCACC GGTTGGGCGC GTAACTTCGA TGACGTCACG GCGTATCTGG GCAAACAGAC CGGGGTGCCC GGGGTGACCG TCGAGGCCGC GCGTTGGCTG GCCGAACGGC GCGTGGTCGC CACCGGAGCC GACACCACGG CCTACGAGCA GATCCCCGCC GGTGCCGGAC ACGCGGTGCT CCCCGTGCAT CGCGTCCTGC TGGTGGAGTC GGGCATCTAC ATCATAGAGC ACCTCAACCT GGAGGAGGTG GCCGAACAGG GCGTGCGTGA GTTCGCCTTC CTGTTGGCCC CACTGCGTAT CGTCGGCGGC ACCGGCTCGC CGATCCGGCC ACTGGCGGCG GTGAGCGCAT GA
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Protein sequence | MTRTQDPLLS AVAGGVRLFE LGQPFFTGMP CSPNHPGFRM TLIRRHGDML RPDGGSAANE IIVTGGHVGT HIDALSHVSH DGKLHGDVDA AQAQQGGVFT THGAENLPGL LRRGVLLDVA AVHGVATLDA GYGITAADLE AAAELAGAEP GEGDVALVRT GWARNFDDVT AYLGKQTGVP GVTVEAARWL AERRVVATGA DTTAYEQIPA GAGHAVLPVH RVLLVESGIY IIEHLNLEEV AEQGVREFAF LLAPLRIVGG TGSPIRPLAA VSA
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