Gene Svir_18600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_18600 
Symbol 
ID8387187 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1973842 
End bp1974663 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content69% 
IMG OID644975928 
Productpredicted metal-dependent hydrolase 
Protein accessionYP_003133710 
Protein GI257055878 
COG category[R] General function prediction only 
COG ID[COG1878] Predicted metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACGTA CACAAGATCC GCTACTTTCC GCCGTCGCCG GTGGGGTGCG GTTGTTCGAG 
CTGGGACAGC CCTTCTTCAC GGGGATGCCG TGCTCACCGA ACCATCCCGG GTTCCGGATG
ACGTTGATCC GCAGACACGG GGACATGCTG CGCCCGGACG GCGGGTCCGC GGCCAACGAG
ATCATCGTCA CGGGTGGTCA CGTGGGCACG CACATCGACG CGCTCTCCCA CGTCAGTCAC
GACGGCAAGT TGCACGGCGA CGTCGATGCC GCGCAGGCAC AGCAGGGCGG CGTGTTCACC
ACCCACGGGG CGGAGAACCT CCCCGGCCTC CTGCGACGCG GGGTGTTGCT GGACGTGGCC
GCCGTCCACG GTGTCGCCAC ACTCGATGCG GGCTACGGCA TCACCGCGGC CGACCTGGAG
GCCGCCGCGG AGTTGGCGGG CGCCGAACCG GGTGAGGGTG ACGTGGCGTT GGTACGCACC
GGTTGGGCGC GTAACTTCGA TGACGTCACG GCGTATCTGG GCAAACAGAC CGGGGTGCCC
GGGGTGACCG TCGAGGCCGC GCGTTGGCTG GCCGAACGGC GCGTGGTCGC CACCGGAGCC
GACACCACGG CCTACGAGCA GATCCCCGCC GGTGCCGGAC ACGCGGTGCT CCCCGTGCAT
CGCGTCCTGC TGGTGGAGTC GGGCATCTAC ATCATAGAGC ACCTCAACCT GGAGGAGGTG
GCCGAACAGG GCGTGCGTGA GTTCGCCTTC CTGTTGGCCC CACTGCGTAT CGTCGGCGGC
ACCGGCTCGC CGATCCGGCC ACTGGCGGCG GTGAGCGCAT GA
 
Protein sequence
MTRTQDPLLS AVAGGVRLFE LGQPFFTGMP CSPNHPGFRM TLIRRHGDML RPDGGSAANE 
IIVTGGHVGT HIDALSHVSH DGKLHGDVDA AQAQQGGVFT THGAENLPGL LRRGVLLDVA
AVHGVATLDA GYGITAADLE AAAELAGAEP GEGDVALVRT GWARNFDDVT AYLGKQTGVP
GVTVEAARWL AERRVVATGA DTTAYEQIPA GAGHAVLPVH RVLLVESGIY IIEHLNLEEV
AEQGVREFAF LLAPLRIVGG TGSPIRPLAA VSA