Gene Svir_18500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_18500 
Symbol 
ID8387177 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1964937 
End bp1966262 
Gene Length1326 bp 
Protein Length441 aa 
Translation table11 
GC content72% 
IMG OID644975918 
ProductProtein of unknown function (DUF1446) 
Protein accessionYP_003133700 
Protein GI257055868 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCCTGG GTGCCGGAGC CGGGTTCGCC GGCGACCGGA TCGACCCGGC CGTGGATCTG 
GCCCGCCGGG GTGGACTGGA CTTCCTGATC TTCGAGTGCC TCGGTGAGCG GACCGTCGCC
GCCGCCCACG CCCGCAGGCT GAGCGATCCG AGTACGGGCT ACGACCCGTT GCTGGCAGCG
CGACTACGCG CGGTCCTGCC CCACACCCAT CGCGGCGGCA CGCGGGTGGT CACCAACTCC
GGGGCCGCGA ACCCGGAAGC GGCAGGCGAG CTCGCCGCTC GCGTCGCCGC CGAACTCGGT
GTGCCCTCCC GGATCGCGGT CGTCGGCGGT GACGACGTGC TGGACATCGT GCGCCGCGTC
GACCCCGTGG TGTGGGAGAC CGACGCGCCG CTGTCGGCCT GCCCGGAGGA ACTGATCTCG
GCCAACGCCT ACCTGGGCGC GGCCCCCGTC GTGGAGGCCC TCGAGCAGGG CGCCGACGTG
ATCGTGACCG GACGGTTGGC CGACCCGGCC CTGTTTTTGG GGCCACTGGT GCACACGTAT
GGCTGGGACG CCGACGACTG GGAACTGCTC GGCGCGGGCA CCGCGGTGGG GCATCTGCTG
GAGTGCGCGG GCCAACTCAC CGGCGGGTAC TTCGCCGATC CCGGCACGAA ACCGGTTCCG
GACCTCGCCC GGCTCGGGTT CCCGTTCGCC GACGTCGCCG CGGACGGCAC CGCCGAACTC
CGCAAACTGG CGGACACCGG TGGCCGATTG GACACCCGGA CCTGCGCCGA GCAACTGCTG
TACGAAGTGG ATGATCCCAC CGCATACCTG ACCCCCGACG TGGTCGCGGA CTTCTCCGAG
GTGACCTTCA CCGGCACCGG CGAGAACCGG GTACGGGTGT CGGGCGCCTC CGGGCGACCT
CGACCGGACC AACTCAAGGT GTCCCTCGGG TTCCGGGGAG GCTGGCTGGG GGAAGGACAG
ATCAGCTACG CGGGTCCCCG CGCTCTGGAC CGGGCCCGCC TGGCCGCCGA CGTCGTGCGC
GAACGGCTCG TCCGGGTCCA CGGAGTCGAC GAGAGCGCGA TCCGGGTCGA GTACATCGGC
GCGGGCGCGG CGTTCCGCGG ACTCGTGGTC GATCCTCAGC CGTTCGAGGT GCGTCTGCGG
GTGTCCGCCC GCGTCCCCGA GCCCGACCAG GCCGAGGTGA TCGGCTGGGA AGTGGAGTCG
CTCTACACCA ACGGCCCGGC GGCGGGCGGT GGCGTCACCC GGACCACACG CGAGACCGTC
GTCGTCCGCT CGTGCCTGTT GCCGCGCCAG CTGGTGACCC CGTTCGTCCA CCTGTTGGAG
GCGTGA
 
Protein sequence
MRLGAGAGFA GDRIDPAVDL ARRGGLDFLI FECLGERTVA AAHARRLSDP STGYDPLLAA 
RLRAVLPHTH RGGTRVVTNS GAANPEAAGE LAARVAAELG VPSRIAVVGG DDVLDIVRRV
DPVVWETDAP LSACPEELIS ANAYLGAAPV VEALEQGADV IVTGRLADPA LFLGPLVHTY
GWDADDWELL GAGTAVGHLL ECAGQLTGGY FADPGTKPVP DLARLGFPFA DVAADGTAEL
RKLADTGGRL DTRTCAEQLL YEVDDPTAYL TPDVVADFSE VTFTGTGENR VRVSGASGRP
RPDQLKVSLG FRGGWLGEGQ ISYAGPRALD RARLAADVVR ERLVRVHGVD ESAIRVEYIG
AGAAFRGLVV DPQPFEVRLR VSARVPEPDQ AEVIGWEVES LYTNGPAAGG GVTRTTRETV
VVRSCLLPRQ LVTPFVHLLE A