| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_18260 |
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| Symbol | |
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| ID | 8387153 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 1893463 |
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| End bp | 1894779 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644975894 |
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| Product | arabinose efflux permease family protein |
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| Protein accession | YP_003133676 |
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| Protein GI | 257055844 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.897354 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGTAT CCACTCAAGT CTCCCGTTCC GGGCAAGGTG ACGCCAAAAT CACCAGGCGT
GTCCTTGTTG GAACGGTGAT CGGTACCACC ATCGAGTGGT ATGATTTCTT CGTCTACGCC
ACCACGGCCG CCCTGGTTTT CGGTGAGCTC TTCTTCGAGC CGCTCGGTCG GGAGAACGCG
GTTCTGAACC AAGTGGTCGC TTTCGCCACC ATCGGGATCA GCTTCCTTTT CAGGCCGCTA
GGGGCGGTGA TCGCCGGGCA TCTCGGTGAC CGGCTGGGGC GGAAGCAGAC CTTGGTGTTG
ACCCTGCTTC TGATGGGCGG GGCGACCACG GCGATGGGAC TGTTGCCGAC GTATGCCCAG
ATCGGCTTCT GGGCACCGCT CATCCTCATG GTCCTGCGGA TCCTGCAAGG GCTTTCCGCC
GGAGGGGAGT GGGGAGGCGC CGCGTTGATG TCCGTGGAGC ACGCCCCTCG GGGACGGCGT
GGCATCAGTG GCGCGTACCC GCAGATCGGT GCCCCGATCG GCATGTTCAC GGCTTCTCTG
GCAGTGAGCG TTATGACCGT GGCCGTCGGG ATGGAGAACT TCGTCGCGTG GGGTTGGCGA
ATCCCGTTCC TCCTCTCGGC GGTGTTGATC CTGGCGGGCT ACATCATCCG CAGGGCCACC
GAGGAATCCC CGGTGTTCGA GGAGCTCCGC GCCCGTCGAC GGGAGTTGTC GGCGCCGCTT
CGGGTGCTCG TCAAGAAGCA CCCGTGGGAG GTGGTGCGAG GCGCTCTCGT CTTCGCCGGT
AACAACGCGG CGGGATGGGT GCTCATCGCG TACATCCCTT CCTACGGCGT GAACACCCTG
GGGCTGGCGC AGGGTGAGGT CTTCGCGGTG ACGGGCCTGG CCGCGGCGGG ATGGGTCGCC
ACCACGCTGT GGAGCGGGTC CGTCTCCGAC CGGCTCGGGC GGGGGAAGAC GTTCCAGATC
GGCTACGTCG CGCTCATCGT CTGGATGATC CCCATGTTCC TGCTGATCGA GCACGAGGCC
ATCTGGTCGC TCGGTGTGGC GGTCGTGGCC CTGACGTTCG GGTTGGGGTT CTCCTACGGT
CCCCTGTCGG CCCTGTACGC GGAGATGTTC CCGGCCGAGG TGCGGTACTC GGGAACCTCC
ATCTCTTACG CCCTCGGCAC CATCGTCGGC GGCGCTTTCG CCCCGATGAT CGCCGAGATC
CTCCTCGCGA GCACCGGATG GTCCCCCTCG ATCGGCCTCT ACCTGATGGC GCTCGCGTTC
ATCTCCCTGC TCGCGGTCAG GGGGGTGCAA GATCGACGCG ATGCTCCGCT GACCTGA
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| Protein sequence | MSVSTQVSRS GQGDAKITRR VLVGTVIGTT IEWYDFFVYA TTAALVFGEL FFEPLGRENA
VLNQVVAFAT IGISFLFRPL GAVIAGHLGD RLGRKQTLVL TLLLMGGATT AMGLLPTYAQ
IGFWAPLILM VLRILQGLSA GGEWGGAALM SVEHAPRGRR GISGAYPQIG APIGMFTASL
AVSVMTVAVG MENFVAWGWR IPFLLSAVLI LAGYIIRRAT EESPVFEELR ARRRELSAPL
RVLVKKHPWE VVRGALVFAG NNAAGWVLIA YIPSYGVNTL GLAQGEVFAV TGLAAAGWVA
TTLWSGSVSD RLGRGKTFQI GYVALIVWMI PMFLLIEHEA IWSLGVAVVA LTFGLGFSYG
PLSALYAEMF PAEVRYSGTS ISYALGTIVG GAFAPMIAEI LLASTGWSPS IGLYLMALAF
ISLLAVRGVQ DRRDAPLT
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