Gene Svir_18250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_18250 
Symbol 
ID8387152 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1891671 
End bp1892090 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content63% 
IMG OID644975893 
Producthypothetical protein 
Protein accessionYP_003133675 
Protein GI257055843 
COG category[S] Function unknown 
COG ID[COG3795] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGTACA TGCTGATCAT GCGCGCCACC GACGAGGGAC TCGCGGCGAT GCAGAACGCC 
GATCTCGACG AGATGCTGGA GACCGTCGGC AAGTTCAACG ACGAGATGAT CCGCGCCGGT
GTCCTCCTCG CCGCGGAGGG ACTCGACGAC GCCTCCGAGG GCGTGGTCGT CGACTACTCC
TCCGAACCTC CCGTGGTCAC CGATGGCCCG TACGGCGAGA CGAAGGAGTT GTTCGGCGGC
TTCTACATCC TCAACGTGGC CTCGAAGGAG GAAGCCATCG AATGGGCCAA GCGGTCACCG
ATGAGGGGGC CGGGATTCAA AACCGAGATC CGTCGGGTCA CCACGATCGA CGAGTTCCCC
CAGGACAACG AGTGGGTCAA AAAAGAACGG GCGTGGCGCG AGGCCACCGG TCAGCTGTGA
 
Protein sequence
MKYMLIMRAT DEGLAAMQNA DLDEMLETVG KFNDEMIRAG VLLAAEGLDD ASEGVVVDYS 
SEPPVVTDGP YGETKELFGG FYILNVASKE EAIEWAKRSP MRGPGFKTEI RRVTTIDEFP
QDNEWVKKER AWREATGQL