Gene Svir_18140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_18140 
Symbol 
ID8387141 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1881907 
End bp1882710 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content66% 
IMG OID644975882 
ProductABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 
Protein accessionYP_003133664 
Protein GI257055832 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCACGA AGATCAGCTT TCAAGGTGTC GGACGCACGT TTCCCGTCCG CGACGGTCGT 
GAGCGTCTCA CGGCGCTCGC GTCGATCGAC CTGGATGTCG CCGACGGTGA ACTTTTGACC
GTGGTGGGGC CCAGCGGCTG CGGCAAATCC ACACTGTTGG ACCTTCTCGC CGGCCTGCTC
ACCCCCACCT CGGGACGCGT CCTGCTCGAC GGCGAAGAGG TGACCGGGCC GGGGTCGGAC
CGCGGCGTCG TCTTCCAGCA GTACGCCCTG CTGCCGTGGC GCACCGCGCA AGGCAACGTC
GAATTCGGCT TGGAGGCCAC CGGTGTCCCG CGCAAGGAGC GAGCGGAGCT GGCTCGCGAA
TATCTCGACC TGGTGGGGCT CGCCGCTTTC GCCGACCGGT ATCCGCATGA ACTCTCCGGC
GGGATGAAGC AGCGTGTGGC GATCGCACGC AGCCTCGCCC ACGACCCCGA GGTACTCCTG
ATGGACGAAC CGTTCGCCGC GCTCGACGCG CAGACCCGGG AGTCCTTGCA GGACGAGCTG
CGACGCATCT GGCGACGTAC CGGAAAGACC GTCGTGTTCA TCACGCACGG CATCGACGAA
GCCGTCTACC TCGGACAACG GGTGGCGGTG CTGACCTCCC GCCCGGGTCG AGTCAAGTCT
GTTGTGGACA TAGATTTGGA CCGGGAGTCG ACGGGCGACG TTCGTTCGAC CCCGGAATTC
GCCCACTATC GACACAAGGT CTGGACACTG CTGCACGACG AGGTCGTGCG CGCACGGACG
TTCAAGGAGG GGTCGCCGGC ATGA
 
Protein sequence
MTTKISFQGV GRTFPVRDGR ERLTALASID LDVADGELLT VVGPSGCGKS TLLDLLAGLL 
TPTSGRVLLD GEEVTGPGSD RGVVFQQYAL LPWRTAQGNV EFGLEATGVP RKERAELARE
YLDLVGLAAF ADRYPHELSG GMKQRVAIAR SLAHDPEVLL MDEPFAALDA QTRESLQDEL
RRIWRRTGKT VVFITHGIDE AVYLGQRVAV LTSRPGRVKS VVDIDLDRES TGDVRSTPEF
AHYRHKVWTL LHDEVVRART FKEGSPA