Gene Svir_18110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_18110 
Symbol 
ID8387138 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1878925 
End bp1880049 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content69% 
IMG OID644975879 
ProductNADH dehydrogenase, FAD-containing subunit 
Protein accessionYP_003133661 
Protein GI257055829 
COG category[C] Energy production and conversion 
COG ID[COG1252] NADH dehydrogenase, FAD-containing subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.87524 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTCAAC ACATCGTGGT GATAGGTGCA GGCTATTCAG GACTCGCGGC GGCGCTGCGG 
GCCGCTCGAC GGCTACCCGA CGCACGCATC ACCCTGATCA ATCCCCGCGC GTATTTCGTC
GAACGGGTGC GGCTGCACCA GCTTGCGGCC GGCCAGCGAC TCCGCCGATA CCCCTTGACC
GACATACTCG GCACAGCGGG CATCGAGCTG GTGGTGGGAA GCGTACGAAC GATCGACACG
GAACGCCGGG AGGTGACCGT CGACTCCCTG GACACGCCGG TGCCGTACGA CACTCTCGTG
TACGCGCTGG GGAGTGTGGC CGACACGAGC ACACCGGGCG TGGCGGAGCA CGCCGCAACC
GTGGCCGGCC CCGCCGAAGC ACAAGCATTG CGGGACAAGG TCGCCACCAT GGCCCGACAA
GAAGGGACCC TGACGGTGGT CGGGGGCGGA CTGACCGGGA TCGAGACCGC GGCGGAGGTG
GCCGAAACGT ATCCGGGTCT CGAGGTTCGG CTGGTGACGG ACACGGAACC CGGGGCCGGG
TTGTCCGAGC GAGGGCGTGC GCATCTGCGT CGCGTGTTCG ACAGACTGGG TGTCGAGGTC
CGTACCGATG CGAAGGTCGT CGAGGTGCAC AGCGACGCCG TCGAACTGGC CGACGGGAAC
ACGATGACGA CGGATCTCGT CGTGTGGGCC ACCGGGTTCG GTGTTCCGGA TCTGGCCGCG
CGCAGCGGTA TCACCGTGGA CAGCGCGGGG CGGATCGTCG TGGACGACAC CCTCCGTTCG
GTGTCGCATC CGGACGTCTA CGCCGTCGGT GACAGCGCGG CCGCCCACCA TCCCGACGGT
TCTCCGTTGC GGATGGCGTG TGCCACCGCA CTACCACTCG GCCGGTATGC CGGTGATGTC
ATCGCCGCGC GTGCGCACGG GCGCTCACCG CGGCCGTTGC GGTTCCGCTA CTTCTTCCAG
TGCCTCAGCC TCGGCCGCGA CGACGGTGTG ATCCAGTTCG TCGACGCCCA CGACCGACCA
CGGGAACGAG TCCTCACCGG ACGCCTCGCC GCCCGGGTCA AGGAGGCGGT GGTGCGGGGC
GCGACGTTCA CAGCACGTCG GTCCGGGCTC TACCCGTCTC GGTAG
 
Protein sequence
MTQHIVVIGA GYSGLAAALR AARRLPDARI TLINPRAYFV ERVRLHQLAA GQRLRRYPLT 
DILGTAGIEL VVGSVRTIDT ERREVTVDSL DTPVPYDTLV YALGSVADTS TPGVAEHAAT
VAGPAEAQAL RDKVATMARQ EGTLTVVGGG LTGIETAAEV AETYPGLEVR LVTDTEPGAG
LSERGRAHLR RVFDRLGVEV RTDAKVVEVH SDAVELADGN TMTTDLVVWA TGFGVPDLAA
RSGITVDSAG RIVVDDTLRS VSHPDVYAVG DSAAAHHPDG SPLRMACATA LPLGRYAGDV
IAARAHGRSP RPLRFRYFFQ CLSLGRDDGV IQFVDAHDRP RERVLTGRLA ARVKEAVVRG
ATFTARRSGL YPSR