| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_18000 |
|---|
| Symbol | |
|---|
| ID | 8387127 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | + |
|---|
| Start bp | 1868132 |
|---|
| End bp | 1869313 |
|---|
| Gene Length | 1182 bp |
|---|
| Protein Length | 393 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644975868 |
|---|
| Product | acetyl-CoA acetyltransferase |
|---|
| Protein accession | YP_003133650 |
|---|
| Protein GI | 257055818 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
|---|
| TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.425657 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.993656 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGATG CAGAGAAGAT CCTGGTCGTC GACGGTGCGC GGACGCCGGT CGGTAGCTTC
GGGGGAGTGT TCAAGGACGT CCCGGCACAC GAACTCGGCG GGATCGCCGG ACGGGCGGCG
CTGCAGCGGG CGGGCGTCGC ACCGGAGGAC GTCGACGAGG TCGTGATGGG CTGCATCGGC
CAGGTCGGTC CCGATGCCTA CAACGCCCGG CGGGTGGCGC TCGAGGCCGG TCTGCCGAAG
CGCACCCCGG CGTACACGGT CAACCGGCTC TGTGGGTCGG GACTGCAGGC GGTGTGGTCG
GCGGCGATGC AGATGCGGTG GGGCGGTGTC GACATCGCGT TGGCTGGTGG GGACGAGAAC
ATGAGCCGGA TGCCGTTCTA CGACTTCGGT GCCCGCTCCG GCTACAAGCT CGGCGACCGC
GCGCTGGTCG ATGGCACGGT GATGATGCTG ACCGATCCGT TCCACAGCAT CCACATGGGT
GTGACGGCGG AGAACGTCGC CCGGAAATAC GAGGTGTCGC GCCAGGCTCA GGACGAGTTC
GCCTGCGAGT CGCAGCGGCG TGCCGCGACG GAGGCCGCGA AAGCGGTGTT CGCCGAGGAG
ATCACGCCGG TCGAGGTCGG CGGACGCAAG CCGTTCACGG TGACCGAGGA CGAGCATCCG
AGGCCGGGGA CGACGCTGGA GGCGTTGGCG AAGCTGCGTC CGGCGTTCGA AAAAGGCGGT
TCGGTGACAG TCGGTAACAC TTCGGGCATC AACGACGGTG CCGCCGCGGT CGTGCTGGCC
CGGGAGTCCG TGGCCGCGCA GCGGGGGCTG ACCGGACTGG TGAGACTGGA GGCGGTGGCG
ACCGCGGCGA TGGAGCCCGA ACTGATGGGG TACGCCCCCG TGCTGGCGTT GAACAAACTC
TTCGAGATGA CCGGCACCGC CCCGTCGGAC ATCGACGTCA TCGAACTGAA CGAGGCGTTC
GCGGCTCAGG CGGTCGCCGT GATCCGGGAC GCCAAACTGG ACCCGGAGAA GGTCAACCCG
TACGGGGGTG CGATCGCGCT GGGCCACCCG GTGGGAGCGA CGGGCGCGAT CCTGACGTTG
CGAGTCGCCA AGGATCTCGT CCGCCGGGAT CTGGAACTGG GGATCGTCAC GATGTGCATC
GGTGGCGGAC AGGCCCTGGC CGCGTTGTTC CGGCGGGTGT GA
|
|---|
| Protein sequence | MADAEKILVV DGARTPVGSF GGVFKDVPAH ELGGIAGRAA LQRAGVAPED VDEVVMGCIG
QVGPDAYNAR RVALEAGLPK RTPAYTVNRL CGSGLQAVWS AAMQMRWGGV DIALAGGDEN
MSRMPFYDFG ARSGYKLGDR ALVDGTVMML TDPFHSIHMG VTAENVARKY EVSRQAQDEF
ACESQRRAAT EAAKAVFAEE ITPVEVGGRK PFTVTEDEHP RPGTTLEALA KLRPAFEKGG
SVTVGNTSGI NDGAAAVVLA RESVAAQRGL TGLVRLEAVA TAAMEPELMG YAPVLALNKL
FEMTGTAPSD IDVIELNEAF AAQAVAVIRD AKLDPEKVNP YGGAIALGHP VGATGAILTL
RVAKDLVRRD LELGIVTMCI GGGQALAALF RRV
|
|---|
| |