| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_17920 |
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| Symbol | |
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| ID | 8387119 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 1859870 |
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| End bp | 1860625 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644975861 |
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| Product | dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein |
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| Protein accession | YP_003133643 |
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| Protein GI | 257055811 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.328183 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.355358 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACG AGTTCACGGG CAAGGTGGTC CTGGTCACCG GTGCGACACG CGGCCTCGGC
TACGCGATCG CCCGTGGTTT CGCGGCGGCC GGAGCGACCG TGGTCGTCTC CAGTCGTAAG
CAGGACGCGT GTGAGCGGGC CGCCGAGGCC ATCACCTCGG AGACCGGGGT ACGTGCGGAC
GCCCTCGCCT TCCACGTCGG CCGTTGGGAC ACGATCACAC CCGCCGTCGA CGAGGTCTAC
AGTAGACACG GAAGGCTCGA CGTCGTCGTC AACAACGCCG GTATCGCGCC CTTGGCGCCG
TCATTGGTCG AGGTGTCCGA GGCGTTGTTC GACAAGACGA TCGAGGTCAA CCTCAAGGGG
CCCTTCCGGC TCACGGCCGT CGCCGGTGCG CGTATGGCTA AGGCGGGGGG CGGGGCGGTC
GTCAACATCT CGAGCATCGG AGCGCATCGG CCCAGCCCAC CGGAGGCGGT GTACGCGGCG
GCGAAGAACG GGCTGAACGC CCTCACCATG GCCTTCGCCC AGGAATACGC GCCGCGTGTC
CGGGTCAACT GTGTCATGCC GGGCGCCTTC GCCACGGAGA TGGCCGCCCA CTGGGACGAG
GAATTCGTGC ACAAGGTGGT CGACCGGCTC CCGGCGGGAC GGCTCGGTGA ACCCGACGAG
ATCGTCGGGA TGGTGCTTCA CCTCGCCTCC GACCGCGCCG GTTACACCAC GGGTGCGGTG
ATCCCCGTGG ACGGAGGCCG AACCGCCGTC TACTGA
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| Protein sequence | MTDEFTGKVV LVTGATRGLG YAIARGFAAA GATVVVSSRK QDACERAAEA ITSETGVRAD
ALAFHVGRWD TITPAVDEVY SRHGRLDVVV NNAGIAPLAP SLVEVSEALF DKTIEVNLKG
PFRLTAVAGA RMAKAGGGAV VNISSIGAHR PSPPEAVYAA AKNGLNALTM AFAQEYAPRV
RVNCVMPGAF ATEMAAHWDE EFVHKVVDRL PAGRLGEPDE IVGMVLHLAS DRAGYTTGAV
IPVDGGRTAV Y
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