| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_17860 |
|---|
| Symbol | |
|---|
| ID | 8387113 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | + |
|---|
| Start bp | 1854094 |
|---|
| End bp | 1854882 |
|---|
| Gene Length | 789 bp |
|---|
| Protein Length | 262 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644975856 |
|---|
| Product | enoyl-CoA hydratase/carnithine racemase |
|---|
| Protein accession | YP_003133638 |
|---|
| Protein GI | 257055806 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.213095 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.535788 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTGAGA CGGACCACGT CATCCTCGAA AAGGACGGCG ACGTCGCGCG GGTGTGGCTG
AACCGGCCGC ACAAGAAGAA CGCCGTCACC GTGGAGCTGC TGCACCGACT GGATGAGATC
ATCACGGAGG TCGACGAGGA CCCCGAGCTG AAGGTCCTCG TCCTGCGCGG TCGGGGCGGC
ACCTTCTGTT CCGGCTTCGA CCTCGACGAA CTGCTCGCGA ACTACGTCGG CAGCACCATG
GCCATGGAGG TCGCGGTCCT GTCCGCCAAG GTGTGCGACC GGCTCTACTC GATGAACACC
CCTTCCGTGG CGGTCCTCGA AGGCCATGTC ACGGCGGGCG GCTTCGAGCT CATGATCTCC
TGCGACTTCG CTGTCGCGGC CGACGACGCC AAGATCGGCG ACTTCCACAT CCGGCGTGCC
CTGTTCGGCG GTGCCGGTCC GATCTACCGT CTGCCCCGCA TGATCGGACT CCGCAAGACC
AAGGAGCTGA TGCTCACCGG CAAGCTGCTC AGCGGTAAGG AGGCCGTCGA CTTCGACCTG
ATCAACGCCT CCGCGCCGGC CGAGGAGCTC GACCAGCTCG TGGCCGACTT CATCGCCCCG
ATCGTCGACA AGAGCCCGTT CACGATGCGG CTGACCAAGA TGACGATCAA CCAGGGTCTC
GACGCCGATG TGCGGTCGCT GATGGTGATG GAGCACCTGG CGGTCGGCAA CGCACTGCAG
TCCGAGGACG CCCGCGAGGG TGTTCAGGCC TTCCTGGAGA AGCGTGAACC CAAGTGGGTC
GGCCGCTGA
|
|---|
| Protein sequence | MVETDHVILE KDGDVARVWL NRPHKKNAVT VELLHRLDEI ITEVDEDPEL KVLVLRGRGG
TFCSGFDLDE LLANYVGSTM AMEVAVLSAK VCDRLYSMNT PSVAVLEGHV TAGGFELMIS
CDFAVAADDA KIGDFHIRRA LFGGAGPIYR LPRMIGLRKT KELMLTGKLL SGKEAVDFDL
INASAPAEEL DQLVADFIAP IVDKSPFTMR LTKMTINQGL DADVRSLMVM EHLAVGNALQ
SEDAREGVQA FLEKREPKWV GR
|
|---|
| |