Gene Svir_17610 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_17610 
Symbol 
ID8387089 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1826603 
End bp1827358 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content70% 
IMG OID644975833 
ProductABC-type cobalamin/Fe3+-siderophore transport system, ATPase component 
Protein accessionYP_003133615 
Protein GI257055783 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGTCG CCGCGCACGA CGTCACCTGG GTCCGCAACG GACACGTCGT ACTCGACGAG 
GTGACCGTCG AAGCGCCCGA GGGATCGATC ACCGGTCTCG TCGGTCCCAA CGGCTCTGGA
AAGACGAGCC TGTTGCTGTT GTTGGCAGGC CTGCATCGGC CGACCCGGGG GCGCGTACTC
CTGGGAACGC GGGACGTCGC GACGATCCCC GTTCGCGAAC GTGCCCGCCT CGTCGCGTTG
CTCGAACAAC ACGCCACGAC GGCACTGGAC CTCACCGTGC GCCAGGTGGT CGAACTCGGC
CGGATCCCCC ACCGCCGCCT CGGTTCACCC GACTCCGCGG GCACGGTGGT CGACGACGCG
ATGGCCGCCG CGAACGTGGA GCACCTGGCC CGGCGACGCT GGCAGACGCT CTCGGGCGGG
GAGCGTCAGC GTGTTCAGCT CGCCCGCGCG CTCGCGCAGC AACCGTCGGT ACTCCTGCTC
GACGAACCCA CGAACCATCT CGACCTCGGG CACCAGCTGG AGTTGATGCG CACCGTCCGG
CGACTCGGGG TGACGGTCGT CGCGGCGCTG CACGACCTCG ACCTGGCCGC GGCGTACTGT
GACCGGCTCG CCGTCCTCGA GACGGGTCAC CTCGTCGCGG CCGGTCCCGT TGACGAGGTG
CTCGACGGTC ATCTCGTCGC CCGGGTCTAC GGCGTGCGCG CCGACGTGGA AAGACACCCG
GCGGCCGACC GACTGACGGT GGTGTGGCAC CCATGA
 
Protein sequence
MRVAAHDVTW VRNGHVVLDE VTVEAPEGSI TGLVGPNGSG KTSLLLLLAG LHRPTRGRVL 
LGTRDVATIP VRERARLVAL LEQHATTALD LTVRQVVELG RIPHRRLGSP DSAGTVVDDA
MAAANVEHLA RRRWQTLSGG ERQRVQLARA LAQQPSVLLL DEPTNHLDLG HQLELMRTVR
RLGVTVVAAL HDLDLAAAYC DRLAVLETGH LVAAGPVDEV LDGHLVARVY GVRADVERHP
AADRLTVVWH P