| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_17590 |
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| Symbol | cobN |
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| ID | 8387087 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 1822357 |
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| End bp | 1825956 |
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| Gene Length | 3600 bp |
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| Protein Length | 1199 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644975831 |
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| Product | cobaltochelatase subunit CobN |
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| Protein accession | YP_003133613 |
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| Protein GI | 257055781 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1429] Cobalamin biosynthesis protein CobN and related Mg-chelatases |
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| TIGRFAM ID | [TIGR02257] cobaltochelatase, CobN subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCGCA TCGCCCTGCT GTCCACTTCC GACACCGATC TGCTGTCGGC CCGTGCCAGC
GGCGCGGACT ACGCCTACGC CAATCCGGTG CGCCTCACCG ACGACACACG CGATGCGCTG
ATCACCGAAG CCGACCTCGT GGTGCTACGT ATCCTCGGCT CCCCCGAGGA TGTCCGGGAT
CTCGCCGACG TCGTACGGGC CACGGGTCGC CCGCTTGTCG TCCTCGGCGG TGAGCGGACG
CCGAACGCGG CCCTCATGGA ACTGTCGACC GTCCCCATCG GAGTCTGCGC ACAGGCGCAC
GTCTACCTCG CCGAGGGCGG GGCGGAGAAC CTCCGCCAGT TGCACGCGTT CCTGTCCGAC
ACCGTGCTGC TCACGGGGGA AGGATTCGAC CCACCTGTCG TGCTACCCGA ATGGGGCGTC
ACCCGGCATC CCGAGTGGTC GGGGCTTCCC CGCGTCGGAG TGCTGTACTA CCGGGCCCAC
GAGGTGAGCG GTAACAACGG TTTCGCGCAC GATCTGGCCG ACGCCGTGGA CGCCACCGGA
CAGGCCGTCG GGATACCGAT CTTCGTCTCG TCGCTGCGCT CGGCACCCGA CGCGTTGTAC
GACGAGCTCG CCACGTTCGA CGCCCTCGTG GTCACGGTGC TCGCCGCGGG AGGTTCCACT
CCCGCCACCG TCGGTGCCGG CGGTGATGAC GAGGCATGGG ACGTCGAGCG ACTGCGTGCT
CTGGACATCC CCATACTCCA GGGGCTGGCG CTCACGTCGA GTCGTGCGGA ATGGGAACGA
TCCGACGACG GCGTCACCCC GCTTGACTCG GCCACCCAGA TCGCGATCCC CGAGTTCGAC
GGCAGGCTCA TCACCGTGCC GTTCTCCTTC AAGGAGATCG ACGCCGACGG ACTGCCCCGG
TACGAGACCG ATCCGGAGCG GTGTGCCCGC GTCGCGCGGA TCGCGGTCAA CCACGCCCGG
CTGCGCCATA TCCCACCGGC CCAACGCAAG GTGGCGCTCG TGCTGTCGGC GTATCCGACC
AAGCACAGCC GCATCGGCAA CGCCGTGGGA CTCGACACCC CGGTCTCGGC GATCCGCCTG
CTACGCAGGA TGCGGGATGC GGGTTACGAC CTCGGCGCCC CCGGCGAGAT CCCCGGTTTG
GACCCACTAC CTCTTGTGGA GGGCGAGGAT CCCGACACCA CGGCCGGCAA CGCCTTGATC
CACGCGCTCA TCGAGGCGGG CGGGCAGGAC GAGGAGTGGT TGACCGAAGC CCAGCTCAGC
GAATCGCACA TACGGATCAG TCCGGACGAC TACCGGCGCT GGACGGCCGA CCTGCCCGCC
GAGCTGCGCG ACGCCATGAC CGAGGCGTGG GGCGAGGCGC CCGGGTCGCT GTTCGTCGAC
GACGACGGCA ACCTCGTGCT GGCCGCCCTG CGAGCGGGCA ACGTCGCCAT CCTCATCCAG
CCGCCGCGCG GTTTCGGGGA GAACCCGGTG GCGATCTACC ACGACCCGGA CCTGCCGCCC
TCCCACCACT ACGTGGCCGC GTACCGATGG CTCGAACACG GTTTCGGTGC CGACGCGGTG
GTCCACCTCG GCAAACACGG TTCGCTGGAA TGGCTGCCGG GCAAGAACGC GGCGTTGTCG
GCCGCCTGCG CCACGGACGC GGCGATCGGG AGCCTGCCGC TGATCTACCC GTTCCTCGTC
AACGACCCCG GCGAGGGCGC GCAGGCCAAG CGTCGCGCGC ACGCCACGAT CATCGACCAC
CTCGTGCCGC CGATGGTCCG CGCCGAGAGC TACGGCGACA TCGCCAAACT GGAGCAACTG
CTCGACGAAC ACGCCAACAT CGCCGCGATG GACCCGGCGA AGCTGCCGGC CATCCGCGCC
CAGATCTGGA CGCTCATCCA GGCCGCGCAG CTGCATCAGG ACCTCGGTCT GGAGGAACGT
CCGGACGACG ACGAGTTCGA CGACTTCCTG CTCCACGTCG ACGGGTGGCT GTGCGAGATC
AAAGACGTCC AGATCCGTGA CGGTCTCCAC ATCCTGGGCC AGGCGCCGAC CGGCGAAGCC
CGGGTGAACC TCGTGCTCGC GATGTTGCGT GCCGCGCAGA TCTGGGGCGG GCAAAGCCGT
GCGCTACCGG GTCTGCGTAC CGCTCTCGGA CTGACCGAGG ACGCGTCGAC CGCGCAGATC
GACGCCGTCG AGGCGCAGGC ACGAGCACTC GTCGAGGCCA TGGAGAAGGC TGACTGGGAC
GTGGCGGCCG TCGACGCCCT GCACGACGAT CCCGTGGTGC GCGACGTGTT GCGCTTCGCC
GCCGAGCAGA TCGTCCCCCG ACTCGCGGCG ACGAGCGACG AGCTGACCAA CGTGCTGCGT
GCCCTCGACG GGCGCTTCAT CCAGGCGGGC CCGTCCGGAT CACCGCTGCG TGGACTCGTC
AACGTCCTGC CCACCGGCCG CAACTTCTAC ACCGTGGACC CGCGCGCCAT CCCGTCTCCC
CTGGCCTGGG AAACCGGTGT CGCGATGGCT GACTCGCTGC TCGCGCGGTA CCGCGAGGAG
ACCGGTGAGT ATCCGCGTTC GGTGGGCCTG TCCGTCTGGG GTACCTCCGC GATGCGCACC
TCCGGCGACG ACATCGCCGA AGTGCTCGCA CTGCTCGGTG TGCGTCCGAC GTGGGACGCC
GCGTCCCGTC GCGTCAGCGG CCTGGAAGTC ATCGACCTCG CTGAGCTCGG CCGTCCACGC
ATCGACGTCA CGGTGCGGAT CTCGGGTTTC TTCCGCGACG CATTCCCCCA CGTCATCGAG
ATTCTCGACG ACGCGGTCCG CCTGGTCGCC GAACTCGACG AGCCGGACGA ACAGAACTAC
GTTCGCGCCC ACGCCCGCGC CGATCTGGCC GAACACGGCG ACGAGCGCAG GGCCACGACC
CGTATCTTCG GCTCCAAACC CGGCTCGTAC GGCGCGGGCA TCCTCCAGGC CGTCGAGTCC
GGTTCGTGGC GGGATGACGC CGATCTCGCC GAGGTCTACA CCGCCTGGGG TGGCTTCGCG
TACGGACGTG GACTCGACGG GGTCGCGGCG AGTGACGACA TGCGCACCAA CTACCGACGC
ATCGCGGTGG CGGCGAAGAA CATCGATTCG CGTGAACACG ACATCGCCGA CTCCGACGAC
TACTTCCAGT ACCACGGCGG CATGATCGCC ACGGTGCGCG CGTTGACCGG CGCCGACCCT
AAGGCCTACG TCGGCGACTC GACCACGCCC GACGCCGTGC GCACGCGCAC GCTCGGCGAG
GAGACCAACC GGGTCTTCCG GTCCCGTGTC GTCAATCCAC GTTGGATCGG TGCCATGCAG
CGGCACGGCT ACAAGGGCGC GTTCGAACTG GCCGCCACGG TCGACTACCT GTTCGGCCTC
GACGCGACCG CGGGCGTCGT GCACGACTGG ATGTACGAGT CGTTGGCCCG CGAGTACGTG
TTGGACGAAG CGAACCAGCG CTTCATGCGG CGGTCGAATC CCTGGGCGCT GCGCGGAATC
ATCGAACGAT TGCACGAGGC CGTCGACCGC GGTCTGTGGG CGGAACCCGA TGCCGACGTC
CTGGCCGAGA TGTCCCGTGT CTATCTCGAC ATCGAAGGAG ACTTGGAGGA CGAGAAGTGA
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| Protein sequence | MTRIALLSTS DTDLLSARAS GADYAYANPV RLTDDTRDAL ITEADLVVLR ILGSPEDVRD
LADVVRATGR PLVVLGGERT PNAALMELST VPIGVCAQAH VYLAEGGAEN LRQLHAFLSD
TVLLTGEGFD PPVVLPEWGV TRHPEWSGLP RVGVLYYRAH EVSGNNGFAH DLADAVDATG
QAVGIPIFVS SLRSAPDALY DELATFDALV VTVLAAGGST PATVGAGGDD EAWDVERLRA
LDIPILQGLA LTSSRAEWER SDDGVTPLDS ATQIAIPEFD GRLITVPFSF KEIDADGLPR
YETDPERCAR VARIAVNHAR LRHIPPAQRK VALVLSAYPT KHSRIGNAVG LDTPVSAIRL
LRRMRDAGYD LGAPGEIPGL DPLPLVEGED PDTTAGNALI HALIEAGGQD EEWLTEAQLS
ESHIRISPDD YRRWTADLPA ELRDAMTEAW GEAPGSLFVD DDGNLVLAAL RAGNVAILIQ
PPRGFGENPV AIYHDPDLPP SHHYVAAYRW LEHGFGADAV VHLGKHGSLE WLPGKNAALS
AACATDAAIG SLPLIYPFLV NDPGEGAQAK RRAHATIIDH LVPPMVRAES YGDIAKLEQL
LDEHANIAAM DPAKLPAIRA QIWTLIQAAQ LHQDLGLEER PDDDEFDDFL LHVDGWLCEI
KDVQIRDGLH ILGQAPTGEA RVNLVLAMLR AAQIWGGQSR ALPGLRTALG LTEDASTAQI
DAVEAQARAL VEAMEKADWD VAAVDALHDD PVVRDVLRFA AEQIVPRLAA TSDELTNVLR
ALDGRFIQAG PSGSPLRGLV NVLPTGRNFY TVDPRAIPSP LAWETGVAMA DSLLARYREE
TGEYPRSVGL SVWGTSAMRT SGDDIAEVLA LLGVRPTWDA ASRRVSGLEV IDLAELGRPR
IDVTVRISGF FRDAFPHVIE ILDDAVRLVA ELDEPDEQNY VRAHARADLA EHGDERRATT
RIFGSKPGSY GAGILQAVES GSWRDDADLA EVYTAWGGFA YGRGLDGVAA SDDMRTNYRR
IAVAAKNIDS REHDIADSDD YFQYHGGMIA TVRALTGADP KAYVGDSTTP DAVRTRTLGE
ETNRVFRSRV VNPRWIGAMQ RHGYKGAFEL AATVDYLFGL DATAGVVHDW MYESLAREYV
LDEANQRFMR RSNPWALRGI IERLHEAVDR GLWAEPDADV LAEMSRVYLD IEGDLEDEK
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