Gene Svir_17380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_17380 
Symbol 
ID8387066 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1797764 
End bp1798198 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content64% 
IMG OID644975810 
Producttransposase family protein 
Protein accessionYP_003133592 
Protein GI257055760 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACCGCG GGAAACCCGG CTCGAAGATC CATGCACTGT CCGACCGGGC GGGACTGCCG 
CTGGCGGTCG CGATCTCGGC CGCGAACACC AACGACGCGC ACGCCCTCAA ACCGCTGATT
CTGGCCATCC CCGCCGTGAA ATCCCGGCGG GGGCCCCGCC GGCGCAAGCC GGACAAGCTC
CACGCCGACA AAGCCTACGA CCAGGCCGAA CTCCGAGACT GGGTACGCAA GCAAGGAATC
ACCGTGCGCA TCGCCCGCAA AGGCATCGAA TCCAGCCAGA AAATCGGCAA GCACCGCTGG
GTCATCGAAC GATGTATCGC GTGGCTGTTC GGATACCGAC GATTGACCAT ACGCTACGAG
CGCTACGCCA ACCACTTCTG CGCCTTCCTC ACTCTCGCCG CAGCCCTCAC CTGCTTCAAG
AAACTCGCGA AATGA
 
Protein sequence
MDRGKPGSKI HALSDRAGLP LAVAISAANT NDAHALKPLI LAIPAVKSRR GPRRRKPDKL 
HADKAYDQAE LRDWVRKQGI TVRIARKGIE SSQKIGKHRW VIERCIAWLF GYRRLTIRYE
RYANHFCAFL TLAAALTCFK KLAK