| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_17360 |
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| Symbol | |
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| ID | 8387065 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 1793237 |
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| End bp | 1796068 |
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| Gene Length | 2832 bp |
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| Protein Length | 943 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644975809 |
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| Product | CRISPR-associated helicase Cas3 |
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| Protein accession | YP_003133591 |
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| Protein GI | 257055759 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1203] Predicted helicases |
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| TIGRFAM ID | [TIGR01587] CRISPR-associated helicase Cas3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCTGATC CTTCGGAACA GCGATGGCTG GAAGCGTTGT GGGGGAAGTC GGCCTCGCGG
GGCGGTGGGC GCCGGAACCT GTTGTTGGCG CACATGTTGG ATACCGCTGC GGTGGCCGAA
TGCCTGTGGG ACCGGTTCTT GGCCCCCGTG ACGCGCCGCT CGGTCGACGA GATCGCGGGA
GGTCCGGGTA AGGGTAGGCC GTTTTTCGCT TGGCTCTGCG GTGTCCACGA TTGTGGAAAA
GCGGTACCCG CCTTCCAGTT CGTGGACGAA GACTGTGCGC GGCTCGTATG GGATGCGGGA
CTGCAATGGG ATCGCCATCG GGTCGCCCGT CAGCCGTGGC GGCATGACAA AGCGGGGGCC
GCGCTGTTGC GGCGCTGCCT ACCGCAAGCG GGCTGGCCGG TCGAACAGAT CGACTGGGTG
TGGCCGTTGG TCGCCGGTCA TCATGGCACG TTCCCTGGTC GCGACGCCCT CTATCTGCGC
CCTGCCGCGT TGCGTGCCGT GCAAGGCGCT TCCGCGGAAT GGCTTCGTGC GCAGGAAGTG
TTGCTGCGGG TCTTCACCGA ACAGCTCGGT TACCGAACCG TGGCTGAGGT GGCGCCGGTG
GAAGTGCCGA ATCGTGCGCT CCAGTTACAG CTCGCCGGCT TGGTCGTGAT GGCCGACTGG
ATCGCCAGCA ACACGACCGT GTTCGAAGGT CTGGACGAAT TGGCGAAGAC GGGCATCGAG
CAGTCCCGGC GCCGCGCGGA CAGGGCGTGG CGGGAGCTGG GCCTGCGCGG TGGGTGGGGT
ACGAGGCCGG TGCCGGGGCC CGAGGCCTTC CGGGACCGAT TCGGTCAGGA CATGCGCCCC
GCCCAGGCGA TGATCGTGGA TGTCGCGCGA CGAATGCCCG ACCCCGGTCT GATGGTGTTC
GAGGCCCCGA TGGGAGAGGG CAAGACCAAG GCGGCCCTGC TGGCTGCCGA GATCCTCGCT
GCTCGCTTCG GGGCCGACGG GGTCTTCGTC GGCATGCCGA CTCAGGCGAC CTGCGACCCC
ATGTTCTCGG AGGTCCGTGG CTGGGTCGCT GCGACGGAGC CGGGGTTGGA AGGCCAGGTG
GCACTGCTGC ACGGCAAGCG CAGACTGAAC AAGCAGTGGC GGGCGTTGCT GGAGGCCACC
GGTGAAGCGC CGATGGACGA TTACTGCGTT CCTGAGGACG ATGCCCAGTA CGGGATGGTC
GCGACCGAGG AGGATTCCGG CGCACCGGAT CGATTGGTGC CCGCGGAATG GTTCCTCGGT
AGTAAACGCG GCTTACTGTG CCCGTTCGTG GTGGGCACGA TCGACCAGCT CCTGTTCGCC
GCGACCCGCA CGAAGCACGT GATGCTGCGT ATGGCCGGGC TGATCGGCAA GGTCGTGATC
CTCGACGAGG TCCACGCATG CGACGTCTAC ATGTCGCAGT TCCTCGAAGA GGGGTTGAGG
TGGTTGGGAC AGGCACGGGT CCCCGTGGTG TTGTTGTCGG CCACCCTGCC TCCGGAGCAA
CGCGAACGGC TGATCAACGC CTATGTGTCC GCTCACGTGC AGCCTTCCAC GCCCGAACCG
GTGCATCCCC CACGGGGATA TCCGAGTGTC ACCGCGGTGT CCGTGGGCAG CGACGGGAAC
GTGCGGGAGC CGATCGTGGA GCACACGGGA TCGTGGCGTC CGGACCAACA CGTGCGGGTC
AGCGTCGTCG ATGAGACACC ACATCAGGGA AGAACAGCCG CGGACGACGC CGAAAACGCC
GTGGCCGATC TGATCGCCGA TCGGCTCCGA GAAGGCGGTT GCGCCCTGGT CATTCGCAAC
ACCGTCGACC GCGCCCAAGC CACCTATCGG ATGCTGGCAC GACGCTTCGG GCGGGATCAG
GTGGGTTTGC TCCACGGACG GCTTCACGCC GGCGACCGAG CTGAACGCAC CGAAGACAAC
CTCGGCAGGT TCGGCCCCGA CCCGGCGAAG CGTGTCCCTC CGGGGACACG GTGGATCCTT
GTCGCGACAA GCCTCGCAGA ACAGTCTTTC GACGTCGATG CCGACCTACT GGTCACCGAC
CTGGCCCCCA TCGACTTGTT GCTGCAGAGG ATCGGACGGC TGCATCGACA CAATCTCGCC
CATCGACCCA CCCCGCTTAA AACTCCCGAA GTGGTGGTGA CCGGGCTCTG TCGACGCGGG
GCCAAGCCGC CCTGGTTGGT GCGGCAGAGC ATCGCGATCT ACGGCGAGTA CCTCCTGTTG
CGCTCGGCCG CGCTGGTCAT CGAAGCCGAG GGCGGGCAAT GGCGGGTACC GAGTCAGGTG
CCGGAGCTGG TTGCGGCGGT GTATGACGGG AAGCCGTTGA GCGTTCCCCG CGCATGGGTC
GAAGCGGAGC ATGCCGCGTA TGTCGACTAT CAGCGCCGTC AGGAGGAGCG CATCGCCAAT
GCCGAGCCGT TTCGGCTCGC TCGCCGAGGC GAGGAACACT CCGGAACCCT CGAAGGACTC
CACGTCGGAG CACATCGCGA AGGTCTGGGG GAACAGCAGT TCCAAGCCCT GGTTCGTGAC
GGAGCGCCCA GTGTGGAAGT CGTACTCGTC CATGAGGGCG ACCGAGGTTA CAGCACCTTG
TCCGGCCGCA GGCTCGGTGT CAACGGGGAT GTCGCCGCGG AACTTTTAGA CGAAATCCTC
GCGGCGACAG TGCGGCTCCC CCAGAGCTTG ACCACATCGG CCGAGGAAAA CCTACGTCCG
TTGCCGGGAT GGCACGGTCA TCCGTGGCTT CGACACACCA AAGCGCTCGT GCTCCACAAT
GGCCGGTCCG ACGTCTTGGG CAAGACCGTG ACCTACGACA GCACCCTCGG CCTGGTGGTG
AACCCGCGGT GA
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| Protein sequence | MADPSEQRWL EALWGKSASR GGGRRNLLLA HMLDTAAVAE CLWDRFLAPV TRRSVDEIAG
GPGKGRPFFA WLCGVHDCGK AVPAFQFVDE DCARLVWDAG LQWDRHRVAR QPWRHDKAGA
ALLRRCLPQA GWPVEQIDWV WPLVAGHHGT FPGRDALYLR PAALRAVQGA SAEWLRAQEV
LLRVFTEQLG YRTVAEVAPV EVPNRALQLQ LAGLVVMADW IASNTTVFEG LDELAKTGIE
QSRRRADRAW RELGLRGGWG TRPVPGPEAF RDRFGQDMRP AQAMIVDVAR RMPDPGLMVF
EAPMGEGKTK AALLAAEILA ARFGADGVFV GMPTQATCDP MFSEVRGWVA ATEPGLEGQV
ALLHGKRRLN KQWRALLEAT GEAPMDDYCV PEDDAQYGMV ATEEDSGAPD RLVPAEWFLG
SKRGLLCPFV VGTIDQLLFA ATRTKHVMLR MAGLIGKVVI LDEVHACDVY MSQFLEEGLR
WLGQARVPVV LLSATLPPEQ RERLINAYVS AHVQPSTPEP VHPPRGYPSV TAVSVGSDGN
VREPIVEHTG SWRPDQHVRV SVVDETPHQG RTAADDAENA VADLIADRLR EGGCALVIRN
TVDRAQATYR MLARRFGRDQ VGLLHGRLHA GDRAERTEDN LGRFGPDPAK RVPPGTRWIL
VATSLAEQSF DVDADLLVTD LAPIDLLLQR IGRLHRHNLA HRPTPLKTPE VVVTGLCRRG
AKPPWLVRQS IAIYGEYLLL RSAALVIEAE GGQWRVPSQV PELVAAVYDG KPLSVPRAWV
EAEHAAYVDY QRRQEERIAN AEPFRLARRG EEHSGTLEGL HVGAHREGLG EQQFQALVRD
GAPSVEVVLV HEGDRGYSTL SGRRLGVNGD VAAELLDEIL AATVRLPQSL TTSAEENLRP
LPGWHGHPWL RHTKALVLHN GRSDVLGKTV TYDSTLGLVV NPR
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