Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_17340 |
Symbol | |
ID | 8387063 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 1790744 |
End bp | 1791325 |
Gene Length | 582 bp |
Protein Length | 193 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644975807 |
Product | CRISPR-associated protein, Cse2 family |
Protein accession | YP_003133589 |
Protein GI | 257055757 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02548] CRISPR system CASCADE complex protein CasB/Cse2 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCTCCA GACACTGGCA CCGCTACGTC ACCGCATTGA CCCGGAACGA GAAGGAACCG TGGCCTGCGG GCACGGGGCC GGAAGATCTG GCAGCGCTTC GCTCCGGGCT CGGCCGAGAG GCCGGGACGG TTCCGAAGAT GTGGCGCTAT TACAGCACCG AGATCGACGA CGCCGCGGTT CGATGGGGTG ACACCGTCCC ACCGGAACTC GCCGCTGAAC ATGCCGCACT CGCTCTGTTC GGGTTGCACC AACGTGCCAA GACCACCCCA ATGCACAAAA AGGGCATCCA TCCGGCTGCG GCACTGCTGC GTTTGCGCCG CCACACCGAC AAGGTCAGTC CCGAGGCGCT CGACCGGCGG GTGGCCATTG CCGTCAGTTC CCCGAGTGTC GCCGTCCTCT GCACTCGGCT GCGCGGGTTG GTTGAGCAAC TTCGCCTTAT CGACCAACCC TGGGACTACG ACCTCCTCCA CACCGACTTG AAGGACTGGC ACTACCCGCA CCGTCGCGAC CGAGTGCGAC GCCGATGGGC GCTCGCCTAC CGAACCTGGA CCGAAACCGA CACCGGTAAC CCCGGTGCCT GA
|
Protein sequence | MTSRHWHRYV TALTRNEKEP WPAGTGPEDL AALRSGLGRE AGTVPKMWRY YSTEIDDAAV RWGDTVPPEL AAEHAALALF GLHQRAKTTP MHKKGIHPAA ALLRLRRHTD KVSPEALDRR VAIAVSSPSV AVLCTRLRGL VEQLRLIDQP WDYDLLHTDL KDWHYPHRRD RVRRRWALAY RTWTETDTGN PGA
|
| |