| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_17200 |
|---|
| Symbol | |
|---|
| ID | 8387051 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | + |
|---|
| Start bp | 1773665 |
|---|
| End bp | 1773994 |
|---|
| Gene Length | 330 bp |
|---|
| Protein Length | 109 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 644975795 |
|---|
| Product | CRISPR-associated protein Cas2 |
|---|
| Protein accession | YP_003133577 |
|---|
| Protein GI | 257055745 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01873] CRISPR-associated endoribonuclease Cas2, E. coli subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCAATC TTGTCGTGAT CTCCACGACC GCTGTGCCGG ATTATGTGCG CGGTTCATTG
AGCCGCTGGT TGACCGAGCC GGCTCCCGGT CTCTACGTCG GGTCGATATC CGCTCGGGTG
CGTGACTCTC TGTGGGAGCA GGTCAGCGCG GCCGTCGGAG AGGGGGCCGC GGTGTGCGTT
CACCCCACCG ACAACGAGCA ACGCTACGTC ATCAAGACCG CAGGCGAACG ACGCCGCCGA
GTCATGGACT TCGACGGCCT GCAACTCATC GCCTTCCGTG ACCTGAACCC GCTGGGGCAA
GGGAACCAGA ACGAACAACC GCCCTTCTAA
|
|---|
| Protein sequence | MPNLVVISTT AVPDYVRGSL SRWLTEPAPG LYVGSISARV RDSLWEQVSA AVGEGAAVCV
HPTDNEQRYV IKTAGERRRR VMDFDGLQLI AFRDLNPLGQ GNQNEQPPF
|
|---|
| |