| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_17190 |
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| Symbol | |
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| ID | 8387050 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 1772673 |
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| End bp | 1773659 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644975794 |
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| Product | CRISPR-associated protein, Cas1 family |
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| Protein accession | YP_003133576 |
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| Protein GI | 257055744 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1518] Uncharacterized protein predicted to be involved in DNA repair |
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| TIGRFAM ID | [TIGR00287] CRISPR-associated endonuclease Cas1
[TIGR03638] CRISPR-associated endonuclease Cas1, ECOLI subtype |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.866435 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACACGTG GTGACGATCA TCCGCGGCGC TTACTCACCG CCCCCACCGT GGCGATGTTG
CCGCGCGTGG CCGACTCGCT GTCGTTTCTG TACTTGGAGA ACGTGCGGGT CGTGCAGGAC
GACACGGGGG TGTGTGCGTA TGTCGAACAG CCGGACGGTG GGACCAGTCG GGTCTATCTA
CCCGTGGCGG CGATCTCCTG CATCCTGTTC GGTACCGGGA CCTCGGTCAC CCAACCCGCC
ATGGCGACGT GCGCGCGCCA CAACACGACG GTGTTGTGGA CCGGATCCGG TGGCGTACGG
ATGTATTCCG GCAGCCTTGC GCCCAACCTG ACGACCGAAT GGTTGGAGCG TCAGGTGCGG
GCCTGGGCGG ATGACTCCAC CCGGTTGGCT GTGGCCGCTC GCATGTATTC CATGCGGTTC
GGTGCCGAAG TCCCGGCCGG AACCAGCCTG AACACCTTGC GGGGTCTTGA GGGCCAGCGA
ATGAAAGCGC TCTACCGCTC GTTGGCGGAC CGCCATGGGC TGCGGGGTTT CAAACGCAAC
TATGACCCGG CGAACTGGGG TGAGCAAAAC CCTGTCAATC AAGCGCTCTC GGCGGCGAAC
ACAGCTTTGT ACGGGGCCGT GCACAGTGCT TTGCTCGCAC TGGGGTGCTC GCCGGCTCTG
GGGTTCATCC ACAGTGGAAA ACAGCACTCA TTCGTCTACG ATGTCGCCGA CTTGTACAAG
GCCAAGCACA CCATCCCGCT GGCTTTCGCG CTCCATAAGA GCGCTCAGCC GGACCGTGAA
GTCCGCATAC GGATGCGGCA GGATTTCCAT CTGTACCGGC TGATGCCCAG GATCGTGCGA
GACGTCCAGC GACTCCTCGA CCCTTCCATC GCCCAGGATC ACGACGAGAC GGGAGAGCCG
GAGGAAGTCG AGCTCGTGCA TTTGTGGGAC CCTGATCTCG GTGCGGTCGA AGCCGGGGTC
AACCATGGCT GGGACTGGGA GGATTGA
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| Protein sequence | MTRGDDHPRR LLTAPTVAML PRVADSLSFL YLENVRVVQD DTGVCAYVEQ PDGGTSRVYL
PVAAISCILF GTGTSVTQPA MATCARHNTT VLWTGSGGVR MYSGSLAPNL TTEWLERQVR
AWADDSTRLA VAARMYSMRF GAEVPAGTSL NTLRGLEGQR MKALYRSLAD RHGLRGFKRN
YDPANWGEQN PVNQALSAAN TALYGAVHSA LLALGCSPAL GFIHSGKQHS FVYDVADLYK
AKHTIPLAFA LHKSAQPDRE VRIRMRQDFH LYRLMPRIVR DVQRLLDPSI AQDHDETGEP
EEVELVHLWD PDLGAVEAGV NHGWDWED
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