Gene Svir_17030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_17030 
Symbol 
ID8387035 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1754085 
End bp1754432 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content67% 
IMG OID644975779 
ProductHIT family hydrolase, diadenosine tetraphosphate hydrolase 
Protein accessionYP_003133562 
Protein GI257055730 
COG category[F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.488 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCACAG ACTGCCTGTT CTGCCGGATC GTCGAGCGTT CCGTGCCGTC CACCGTGGTG 
CACGAGACGG ACGACGTGCT CGCGTTCCGT GACATCAATC CCCAGGCTGA CACCCATGTC
CTGGTGATTC CGAAGGAGCA CTACCCCGAC GCCGCGTCGA TGGCGGCGGC CGATCCCAAG
CTCGCGGGTG AGGTGCTCGC GACCGCAGGC GAGGTCGCCA AGATCGAGGG CGTGGACTCC
TCCGGTTACC GGCTGGTGTT CAACACGGGG CCGGACGCCC AGCAGACGGT CTTTCACGTC
CACTGCCACG TGCTCGGTGG CCGCAGCTTC ACCTGGCCCC CGGGGTGA
 
Protein sequence
MSTDCLFCRI VERSVPSTVV HETDDVLAFR DINPQADTHV LVIPKEHYPD AASMAAADPK 
LAGEVLATAG EVAKIEGVDS SGYRLVFNTG PDAQQTVFHV HCHVLGGRSF TWPPG