Gene Svir_17020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_17020 
Symbol 
ID8387034 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1753445 
End bp1754059 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content71% 
IMG OID644975778 
Producthypothetical protein 
Protein accessionYP_003133561 
Protein GI257055729 
COG category[S] Function unknown 
COG ID[COG3832] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.497051 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGACA TCGCCGATCG ACTCACCGCG ACTTACCGCG AGGTACGCAC GAGCGACTCG 
ACGGACGCCG CCTGTGCCCT GGTGATTCGA CGCCGGTTCC GGTGCGCGGT CGACACCGTG
TGGCAGGCCG TCACCGAACC CGACCGGATC CGGGCGTGGT TCGCTCCGTT CACCGGAGGG
GCTCGTGTGG GTGAGTCCTT CGAGGTGGAG GGGCATGCCA CGGGCACGGT GCTGGAATGC
GTGCCGCCGC ACCTGTTCAC CGTCACCTGG GGCGACGGGG CGAACGTGAC GGTTCGGCTG
GCGCCGGACG AGCACGCCAA CGCCGTTCTG GAGCTCGTCC ACGCCGGCCT GCCCACGGAC
GGCGCAGTAC GTCAGGGTCC GATGTGGGAT GTCGCCATCG CGAGCCTGGA CCGGTTCGTC
ACCGAGGACA CCGCCGACGA TCTCGCCGCT TGGCGCGCCT CAGCCGAGGT GCAGACCTTC
GCCCAGCACT CGGTGAGTGC CTGGGTCACG GCGACCGAGG CGTCCGGGGC CGCGACGGCC
GAGGACTTGG CCGACGCCGT TCGGGCATGT CTGCAGCGGA TGGCCCCCGA CCTGATGCCG
CCCGCCCCCG CGTGA
 
Protein sequence
MIDIADRLTA TYREVRTSDS TDAACALVIR RRFRCAVDTV WQAVTEPDRI RAWFAPFTGG 
ARVGESFEVE GHATGTVLEC VPPHLFTVTW GDGANVTVRL APDEHANAVL ELVHAGLPTD
GAVRQGPMWD VAIASLDRFV TEDTADDLAA WRASAEVQTF AQHSVSAWVT ATEASGAATA
EDLADAVRAC LQRMAPDLMP PAPA