Gene Svir_16970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_16970 
Symbol 
ID8387029 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1749005 
End bp1749469 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content68% 
IMG OID644975773 
Productpredicted NTP pyrophosphohydrolase 
Protein accessionYP_003133556 
Protein GI257055724 
COG category[L] Replication, recombination and repair
[R] General function prediction only 
COG ID[COG4119] Predicted NTP pyrophosphohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.542075 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.366756 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCCGC GGCGTAGCGC GGGGATACTG CTGTATCGCG TGGTCGACGA CGTGCCCCAC 
GTGTTGCTCG GCCACATGGG CGGACCGTTC TGGGCGCGTC GTGACGCAGG GGCCTGGACC
GTGCCGAAAG GCGAGTACGG AAGCGACGAA GGACCCGAAG CGGCGGCGCG ACGGGAATTC
ACCGAGGAAC TCGGCATGCC GCCACCGGAG GGCAGGCTCG TGTCGCTGGG TGAGGTGCGG
CAGTCCGGTG GCAAGGTCGT GACCGCGTTC GCGCTGCGCG GCGAGCTGGA CCCCGACGCG
ATCGCCCCGG GAACGTTCTC GCTGGAATGG CCCACGGGGT CGGGTGTGGT GCGCGAATTC
CCCGAAGTGG ATCGAGTCGC GTGGTTTACC CTCGATCGGG CGAGAAGCAA ACTCGTGGTA
GCGCAGCGGG TGTTCGTGGA CCGGCTCGCG GCGTATCTCC ATTGA
 
Protein sequence
MAPRRSAGIL LYRVVDDVPH VLLGHMGGPF WARRDAGAWT VPKGEYGSDE GPEAAARREF 
TEELGMPPPE GRLVSLGEVR QSGGKVVTAF ALRGELDPDA IAPGTFSLEW PTGSGVVREF
PEVDRVAWFT LDRARSKLVV AQRVFVDRLA AYLH