Gene Svir_16910 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_16910 
Symbol 
ID8387023 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1743010 
End bp1744011 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content70% 
IMG OID644975767 
Productselenophosphate synthase 
Protein accessionYP_003133551 
Protein GI257055719 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0709] Selenophosphate synthase 
TIGRFAM ID[TIGR00476] selenium donor protein 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.254595 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.381057 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATACC GACTGACCCA GTACGCCCAC GGAGGCGGCT GCGCGTGCAA GATCCCACCC 
GGTGAACTGG AGAACGTGGT CCGTGGCCTG CTGGACGATC CGCAGCTCAC CCCCACCTCA
CCCGCCGGTG AGCTGCTCGT GGGCCTCGAC GACGGTGACG ACGCCGCCGC CGTTCGGCTC
GACGGCGACC GCGCCGTCAT CGCGACCACG GACTTCTTCA CCCCTGTCGT GGACGACCCG
TACGACTGGG GACGCATCGC CGCCACCAAC GCGTTGTCCG ACGTCTACGC GATGGGCGGC
ACACCGTTGG TGGCGGTGAA TCTCCTGTGC TGGCCGCGGG AGACGCTGCC CTTCGACCTG
GCCGCCGAGG TGTTACGCGG TGGCGCGGAG GTGTGCGCAC AGGCGGGCTG CCACCTCGCC
GGTGGGCACA GCGTGGACGA TCCGGAACCA AAGTACGGTC TGGCCGTCAC CGGTCTGGCG
TTGGCGGACA GGCTGATGCG TAACGACGCC GGGCGCCCCG GCCTGCCGCT GTCGTTGACG
AAACCTTTGG GCGTGGGTGT GTTGAACACG CGACACAAGG CGACCGGCGA GTCCTTCGAC
GAGGCCGTCG AGGTGATGAC GACGTTGAAC GCCGACGCCT CACAGGCGGC GGTGTCGGCG
GGAATCCGCT GCGCGACCGA TGTCACGGGA TTCGGGCTGC TCGGCCATCT CTACAAATTG
GCGCGAGCCA GTGGGGTCAC CGCCGTGGTC GACTCAGCCG CGGTCCCGGT GCTGGAGGCC
GCGCGCGAGG CCGTGCGCGC GGGATACGTC TCGGGCGGCA CGCGCCGCAA TCTGGACTGG
GTGCGTCCGT ACACCGACCT CTCCGGGGTG GCCGAGGAAA CGGCGCTGCT GCTCGCCGAC
GCCCAGACCT CGGGCGGGCT GTTGGTGGCC GGGGAACTGC CGGGAGCACC CGTGATCGGA
CAGCTCGTGC CCCGCGGCGA ACACATCGTC GTGGTGCGGT GA
 
Protein sequence
MAYRLTQYAH GGGCACKIPP GELENVVRGL LDDPQLTPTS PAGELLVGLD DGDDAAAVRL 
DGDRAVIATT DFFTPVVDDP YDWGRIAATN ALSDVYAMGG TPLVAVNLLC WPRETLPFDL
AAEVLRGGAE VCAQAGCHLA GGHSVDDPEP KYGLAVTGLA LADRLMRNDA GRPGLPLSLT
KPLGVGVLNT RHKATGESFD EAVEVMTTLN ADASQAAVSA GIRCATDVTG FGLLGHLYKL
ARASGVTAVV DSAAVPVLEA AREAVRAGYV SGGTRRNLDW VRPYTDLSGV AEETALLLAD
AQTSGGLLVA GELPGAPVIG QLVPRGEHIV VVR