Gene Svir_16900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_16900 
Symbol 
ID8387022 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1742383 
End bp1742928 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content70% 
IMG OID644975766 
Productconserved hypothetical protein TIGR00481 
Protein accessionYP_003133550 
Protein GI257055718 
COG category[R] General function prediction only 
COG ID[COG1881] Phospholipid-binding protein 
TIGRFAM ID[TIGR00481] Raf kinase inhibitor-like protein, YbhB/YbcL family 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.117094 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.249296 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGACC AGGCACGGGA CCGTGCGACC GGTCCGGAAG GCGCCCGGGA CACCGGTCGG 
GGTGATGTGT CGTCCGCCGG GCCGTCCCAC TCCCCCGCGT CCGACCTGGA GCTGCGCAGT
CCGGCCTTCT CCGAAGGCGC CTCGATCCCG CAACGCTATT CCCGGCAGGG TGGTAACGAG
GTACCGCCGT TGGAATGGAC GCGGGTACCC GAGGGTACGG AGGAGTTGGC TCTGCTGTGC
GAGGATCCGG ACGCGCCCGG GGGCGTGTTC ACACACTGGG TCGTCACGTC GATCCCACCT
GAGACAGCCA GGATCGACGA CGCGCTCTCG GCGGGCGCCG AGCTCGGCCA AAACGACTTC
GGCGAGCTGG GTTGGAGCGG ACCGCAGCCC CCCGTGGGCG ACGGGGAGCA TCGCTACTTC
TTCCGACTCT ACGCCGTGGA CCGGCCCCTC GGACTCGGCG AGGGCGCCTC GGCGGAGGAC
GTCCACGCCG CCGTCGATGA ACACATCCTG GCCACCGACA CGCTCGTCGG ACTGTTCGCC
CGTTGA
 
Protein sequence
MADQARDRAT GPEGARDTGR GDVSSAGPSH SPASDLELRS PAFSEGASIP QRYSRQGGNE 
VPPLEWTRVP EGTEELALLC EDPDAPGGVF THWVVTSIPP ETARIDDALS AGAELGQNDF
GELGWSGPQP PVGDGEHRYF FRLYAVDRPL GLGEGASAED VHAAVDEHIL ATDTLVGLFA
R