Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_16800 |
Symbol | |
ID | 8387012 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 1733898 |
End bp | 1735016 |
Gene Length | 1119 bp |
Protein Length | 372 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644975756 |
Product | DnaJ-class molecular chaperone with C-terminal Zn finger domain protein |
Protein accession | YP_003133540 |
Protein GI | 257055708 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.989082 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.640022 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCCGAGG TCGACTATTA CGAACTACTG GGAATCGCCC GTGACGCCAC ACCCGGGGAG ATCAAGTCGG CCTACCGGGC GCTGGCTCTC CGGGCGCATC CGGACGCGGG TGGTTCGGCG GAGGAATTCC AGCTGCTCCG GTCGGCCTAC GAGACCCTGT CCGATCCGGT GTCGCGTGCG GCCTACGACC GCCGCGGCAG ACGCCCCTCG ATGGCGTTGG CGGCGGAAAG ACGCGCGGAA CGCTGGGCGA GGCCGCGTCG GTTCGGTGAG GACCCGGATT TCGTGCCCAC CGTGCCCGAC ATCGATGTGA CGCACCTTCC GTGGTGGCGC ATGATGGAGG GCGTCTCCCG AGTGCACTAC GCCCACCCGG GCTCACCGGG ACACGCCCCG GCGGCCGGGG CCGTGGCGGG TGCCGTACTG CTACCGCTTC CGCTGGTACT GCCGTTCGCG TTCTCCGTGT GGTTGATGTC GGTGTGGGTC CTGCTCGTGG TCTCGGCCGT GGCCGCGACG GTCCTCCTCG TACGGCGGCA TCTGGAGTCG CTGCGCACGG TGCGGTCGTT TCGCAGCGAG TTCGGTGACC GGATCGTGTT CGGCTCTCCG GGGGCCGAAC CGGACGAGGT TGCGGAACGA CTGACGGCCG AGTTGCTCGA GCGCTACCTC ACACGTCTGC CCGGGGTCCG GATCTTCCAC GGGCTCGCCT GGCCCGATTC GGTGTTCGCC GACGTCGACC ACGCGGTGCT GTGTGGACGC AGACTCGTCC TGGTGGAGTC GAAGTCGTGG CTTCCGGGTC ACTACGCCCT GGCCGAGGAC GGCACCCTCA CCCGGAACGG GCGCCGGTTC CGGGGTGGTG GCACCCAGTT GCCCACCAGC GTGGAGGCGT TCCGCCGGTT GCTGCCGGAT GTGGAGGTAC GGGGCGCTTT GGTGCTCTAC CCGAGCCGCG AGGGTGAGAT CACCACCGAC GAGCAGGACG ACGGTGACGC GCCCCCGATG ACCCCGGAAC AGTTCGTACG GCAGCTGGGC GACTGGCTGG CCGCCGAACC CGTCACCGTG GACCGGCACG TGTTCCGCAC CGTGCTCGGC CAGGTGGTGA GTCCTTCGTC CACACCCACC AACGCGTGA
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Protein sequence | MAEVDYYELL GIARDATPGE IKSAYRALAL RAHPDAGGSA EEFQLLRSAY ETLSDPVSRA AYDRRGRRPS MALAAERRAE RWARPRRFGE DPDFVPTVPD IDVTHLPWWR MMEGVSRVHY AHPGSPGHAP AAGAVAGAVL LPLPLVLPFA FSVWLMSVWV LLVVSAVAAT VLLVRRHLES LRTVRSFRSE FGDRIVFGSP GAEPDEVAER LTAELLERYL TRLPGVRIFH GLAWPDSVFA DVDHAVLCGR RLVLVESKSW LPGHYALAED GTLTRNGRRF RGGGTQLPTS VEAFRRLLPD VEVRGALVLY PSREGEITTD EQDDGDAPPM TPEQFVRQLG DWLAAEPVTV DRHVFRTVLG QVVSPSSTPT NA
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