| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_16560 |
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| Symbol | |
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| ID | 8386988 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 1708378 |
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| End bp | 1710597 |
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| Gene Length | 2220 bp |
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| Protein Length | 739 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644975732 |
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| Product | carbon starvation protein, predicted membrane protein |
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| Protein accession | YP_003133516 |
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| Protein GI | 257055684 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1966] Carbon starvation protein, predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAACGG TCGGGCATCC ACCGGTCGAG GTGAGCGACA AACCCCGCTG GACTCCGGGC
AAGATCGCGC TCTGGGTGGC GATCTCGTTG CTCGGGGCCA CCGCCTGGAC CATTCTCGCG
CTGGCCAGGG ACGAGCAGGT GAACGCGATC TGGTTCATCT TCGCGGCACT GTGCTCGTAC
GCGATCGCCT ATCGGTTCTA CGCGAGGTTC ATCCTCACGA AGGTCCTCAA GGCCGACGAC
AAGCGTGCCA CCCCGGCGGA GCGGCTGGAG AACGGCGCCG ACTACAACCG CACCGACCGC
CGAGTGCTCT ACGGGCACCA CTTCGCGGCC ATCGCGGGGG CCGGTCCTCT GGTGGGACCG
GTGCTCGCCG CGCAGATGGG TTATCTCCCC GGCACGATCT GGATCATCGT CGGTGTCATC
TTCGCGGGCG CCGTGCAGGA CATGGTGGTG CTGTTCTTCT CGATGCGCCG CAACGGTCGA
TCGCTCGGTC AGATGGCCCG TGACGAGATC GGCCCCATCG GCGGTGCCGC CGCCATCATC
GCGGTCCTGG TCATCATGAT CATCCTGCTG GCGGTGTTGG CGCTCGTGGT GGTGAACGCG
CTCGCCGAAT CGCCGTGGGG CGTGTTCTCG ATCGCGATGA CCATCCCCAT CGCGTTCTTC
ATGGGCTTCT ACCTGCGTTA CCTGCGGCCG GGTCGGGTCA CCGAGGTCAG CCTCATCGGC
TGTGCGCTGT TGCTGCTCGC CATCGTCGCG GGCGGTTGGG TCGCCGAGTC GTCCTGGGCC
CCGGTGTTCA CGCTGGACAA GGTCACGCTG GTCTGGTGCC TCATCATCTA CGGCTTCCTC
GCGTCGGTCC TGCCCGTGTG GATGCTGTTG GCGCCCCGGG ACTACCTGTC GACGTTCATG
AAGGTCGGCA CCATCGTCCT GCTCGCGGGC GGTGTCCTCA TCGCGATGCC GGCCACCACG
ATGCCCGCGT TCACCGAGTT CGCGTTCACC GGGGAGGGAC CGGCGTTCGC GGGTTCGCTC
TTCCCGTTCG TGTTCATCAC CATCGCCTGT GGTGCGTTGT CGGGTTTCCA CGCGCTGGTC
GCCTCAGGGA CCACGCCGAA GATGGTGGCC AAGGAACGGC AGGTCAGGCT CATCGGCTAC
GGCGGCATGC TCACCGAGTC GTTCGTGGCG ATCATGGCGC TCGTCGCGGC CTGCGTGATC
GACCAAGGTC TGTACTTCGC CATGAACTCG GCGGCGGGAG CCACGGGCGG CACGGCCCAG
GGCGCGGCGC AGTTCGTCAA CGGGCTCGAC CTGCCCGGCG TGTCCACCAC CCCGGAGGCG
CTGAACGAGG CGGCGGCCTC GGTGCAGGAG GAATCGCTGG TGTCGCGCAC CGGCGGTGCG
CCGACGCTCG CGGTGGGGAT CTCGGAGATC CTCGGCGGGG TCTTCGGCGG CGCGGCGGCG
AAGGCGTTCT GGTACCACTT CGCGATCATG TTCGAGGCCC TGTTCATCCT CACCACGGTG
GACGCCGGGA CCCGCGTGGG CCGCTTCATG TTGCAGGACA CCCTCGGCAA CGTGGTGCCG
AAGTTCAAGG ACACGTCGTG GCGGCCCGGA GCGATCCTGG CCAGCGCAGT GATCGTGGCC
GCGTGGGGAT CGATCCTGCT GATGGGCGTC ACCGACCCGC TCGGCGGTAT CAACACGCTG
TTCCCACTGT TCGGCATCGC CAACCAACTG CTGGCCGCCG TGGCGCTCAC CGTGTGTGTG
ACGATTCTGT GTAAGACCGG ACGGGTCAAA TACGCCTGGG TCCCGGGCAT CCCCCTGGTG
TGGGACGTCG TCGTCACGCT CACGGCCAGC TGGCAGAAGA TCTTCAGCAG TGATCCGAGT
ATCGGTTACT GGGCCCAGCA CAACGCCTAC AAGGAGGCAC TCGCGGCGGG TGAGACGTCC
ATGGGGCCCG CCGAGAACGT GATGCAGATG GAACAGGTGG TGCGTAACAC GTTCATCCAA
GGCAGCCTGT CCATCGTCTT CGCCCTGTTG ATCGTGGTGG TGCTCCTCGA CGCGCTCTGG
AAGTCGATCA GCGCCATCCG CTCCGGACGG ATCAGCGACA CCGAACATCC CGCGGAGGAG
TCGCACATCT TCGAACCGGC GGGTCTGTTC GCCACCGCGG AGGAGAAACG TCTCCAGGCC
CAGTGGCGTG AGTGGGAGGC CGGACAAACC GGACAGGAAC CCACGGCGGT GCGGACATGA
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| Protein sequence | MATVGHPPVE VSDKPRWTPG KIALWVAISL LGATAWTILA LARDEQVNAI WFIFAALCSY
AIAYRFYARF ILTKVLKADD KRATPAERLE NGADYNRTDR RVLYGHHFAA IAGAGPLVGP
VLAAQMGYLP GTIWIIVGVI FAGAVQDMVV LFFSMRRNGR SLGQMARDEI GPIGGAAAII
AVLVIMIILL AVLALVVVNA LAESPWGVFS IAMTIPIAFF MGFYLRYLRP GRVTEVSLIG
CALLLLAIVA GGWVAESSWA PVFTLDKVTL VWCLIIYGFL ASVLPVWMLL APRDYLSTFM
KVGTIVLLAG GVLIAMPATT MPAFTEFAFT GEGPAFAGSL FPFVFITIAC GALSGFHALV
ASGTTPKMVA KERQVRLIGY GGMLTESFVA IMALVAACVI DQGLYFAMNS AAGATGGTAQ
GAAQFVNGLD LPGVSTTPEA LNEAAASVQE ESLVSRTGGA PTLAVGISEI LGGVFGGAAA
KAFWYHFAIM FEALFILTTV DAGTRVGRFM LQDTLGNVVP KFKDTSWRPG AILASAVIVA
AWGSILLMGV TDPLGGINTL FPLFGIANQL LAAVALTVCV TILCKTGRVK YAWVPGIPLV
WDVVVTLTAS WQKIFSSDPS IGYWAQHNAY KEALAAGETS MGPAENVMQM EQVVRNTFIQ
GSLSIVFALL IVVVLLDALW KSISAIRSGR ISDTEHPAEE SHIFEPAGLF ATAEEKRLQA
QWREWEAGQT GQEPTAVRT
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