| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_16450 |
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| Symbol | lysS |
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| ID | 8386977 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 1694973 |
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| End bp | 1696472 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644975721 |
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| Product | lysyl-tRNA synthetase |
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| Protein accession | YP_003133505 |
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| Protein GI | 257055673 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
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| TIGRFAM ID | [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTGACG CGCTGGACGA TTTCCACGAG GACCTGCCCG AGCAGATGCG CATCCGGCGA
GAGAAGCTGG AGCGGCTGCG CGCCTCGGGC GTCGACCCCT ACCCCGTCGG ATACCCCAGG
ACCACCACGA TCGGCCAGGT CCGCGAACGC CACGGGGACC TGGAACCCGA CCACCACACC
GGCGAGCGCG TCTCGATCAC CGGCCGAGTG ATGCTGTACC GCACGGGCGG CAAGCTGTGC
TTCGCCACCA TCCGCGACGC CTCCGGCCAG ATCCAGATCA TGCTGTCGCT CGACAAAGTG
GGGGCCGAGT CTCTCCAGTC CTGGAAGAGT GACATCGATC TCGGCGACCA CGTCGGTGTC
ACCGGCGAGG TCATCACGTC CAAGCGTGGC GAGCTGTCGG TGCTGGTCGA CGAGTGGCGG
CTGACGTCCA AGGCACTACG CCCCCTGCCC GAGAAGCACA AGGGTCTGAC CGACCCGGAG
GCCCGGGTCC GGCAGCGCTA CGTCGACCTG ATCGTCAACC CCGAGGCCCG GCAGATGGTG
CGGCACCGGG CCGCCACACT CCAGGCGCTG CGTTCGGGGC TGTTGGAGCG TGGGTTCCTC
GAGGTGGAGA CCCCGATGCT CCACCTGGTG CACGGTGGGG CGACGGCACG TCCGTTCACC
ACGCACATCA ATGCCTACGA TCTCGACCTC TACCTGCGTA TCGCCCCCGA GCTGTTCCTC
AAGCGACTCG TGGTCGGCGG GATGGAGAAG GTCTTCGAGA TCAACCGGTC CTTCCGGAAC
GAGGGCGCCG ACTCCACGCA CAACCCCGAG TTCACGATGC TGGAGTGGTA CATGGCCTAC
GGCGACTACA ACGACGGCAT GGGGGTCACC CAGGACCTCA TGCGTCGTGC GGCCGAGGCC
GTCTTCGGTG ACACGGTCGT GCGCAACCCC AAGTACGGCG AGGTCGATCT AAGCGGTGAC
TGGCCGCAGA TCACGCTGTA CGGGTCGGTG TCGGAAGCCC TCGACGCCGA GATCACCCCG
CGTACCCCCA TCGAGGTACT GCGTCGACAC GCCGATGACC GCGACATCAG CTGGGATCCG
TCCTGGGGGC CGGGCAAGCT CGTGGAGCAC CTGTTCGAGG AGCTGGTCGA GCACACGTTG
ATCCAGCCCA CGTTCGTGCG GGACTACCCG TTGGAGACCA GCCCGCTCAC CCGCCAGCAC
CGCGACGACC CGTTGCTGGT GGAGAAGTGG GATCTCATCG GCTTCGGCAT GGAGCTGGGG
ACCTGCTTCT CCGAGCTGAT CGACCCGGTG GAGCAGCGCA GGCGCCTCAC CGAACAGTCC
CTGCTGGCCG CGGACGGCGA TCCGGAGGCC ATGCAGCTCG ACGAGGACTT CCTGCGTGCT
TTGGAATACG GCATGCCACC GACCGTCGGC GTGGGTATGG GTATCGACCG GCTGTTGATG
GCCTTCACCG GTAAGGGCAT CCGCGAAACC ATCCTGTTCC CGATGGTCAA GCCCGTCTGA
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| Protein sequence | MSDALDDFHE DLPEQMRIRR EKLERLRASG VDPYPVGYPR TTTIGQVRER HGDLEPDHHT
GERVSITGRV MLYRTGGKLC FATIRDASGQ IQIMLSLDKV GAESLQSWKS DIDLGDHVGV
TGEVITSKRG ELSVLVDEWR LTSKALRPLP EKHKGLTDPE ARVRQRYVDL IVNPEARQMV
RHRAATLQAL RSGLLERGFL EVETPMLHLV HGGATARPFT THINAYDLDL YLRIAPELFL
KRLVVGGMEK VFEINRSFRN EGADSTHNPE FTMLEWYMAY GDYNDGMGVT QDLMRRAAEA
VFGDTVVRNP KYGEVDLSGD WPQITLYGSV SEALDAEITP RTPIEVLRRH ADDRDISWDP
SWGPGKLVEH LFEELVEHTL IQPTFVRDYP LETSPLTRQH RDDPLLVEKW DLIGFGMELG
TCFSELIDPV EQRRRLTEQS LLAADGDPEA MQLDEDFLRA LEYGMPPTVG VGMGIDRLLM
AFTGKGIRET ILFPMVKPV
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