Gene Svir_16420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_16420 
Symbol 
ID8386974 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1691505 
End bp1693082 
Gene Length1578 bp 
Protein Length525 aa 
Translation table11 
GC content64% 
IMG OID644975718 
Productpredicted flavoprotein involved in K+ transport 
Protein accessionYP_003133502 
Protein GI257055670 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2072] Predicted flavoprotein involved in K+ transport 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGATCA TCAACACCAC CGTGCTCATC ATCGGTGCCG GGTTCGGAGG TGTCGCCACG 
GCGATCGAGC TTCGCCGCGC GGGGATCCAC GACGTCGTCG TGTTGGAAGC GGCGGACGAC
GTGGGCGGGG TGTGGCGGGA GAACACCTAC CCCGGCGCCG GCTGTGACGT GCCTTCACCG
CTGTACTCGT TCTCGTTCGC CCCCAATACC CAGTGGCCGC GACGCTATGC ACTGCAACCG
GACATCCTCG CTTATCTCCG ACAGGTGGCT CGCAGGTTCG GCGTGCTCGG TCTGGTGCGC
TTCCGCAGCA AGGTCGTCTC GGCCGAGTTC GATCCGGATA TCGCACGGTG GCGTGTGCGC
ACCGCCGATG GCACGACCTA TCTCACACGG GTGTTGATTC CGGCCACGGG CCAGTTGTCC
CAACCGGTGT ATCCGTCGAT CCCGGGTATC GACACGTTCA CCGGGGTCTC GTTCCACTCG
GCACGGTGGA ACCACGATTG CGACCTTTCC GGCAAACGCG TCGCCGTGAT CGGCACCGGC
GCCAGCGCAG TCCAATTCGT ACCCTTCTTA CAACGGGAAG CGGCGTCGGT GGCGGTTTTC
CAACGCAGCG CCCCCTACGT TCTGCCCAGA CGCGACCGCG TCTACACCCC GAGGCAACAC
CGACTGTTGC GCGCACTGCC GATCCTGCAG AAAGCCGACC GTCTCGGATT CTGGCTGTAC
ACCGAGTTCG CTCAGGAATG CCTCTCCCGT TGGCAGTTCT TCACTCCACT GTTTTATTTC
CAGGCCCGTC GACACCTACG GAAGCAGGTC GCGGACCCGG TGTTGCGCAA GAAACTCACT
CCCGATTATG CACTCGGCTG CAAGCGAGTC CTGTTCAGCA ACGACTACTA TCCCGCGCTC
ACTTCATCCA CTGTGGACGT CATCACCGAA CGCATCGACG CGGTGACCCC GAAGGGCATT
CGCACGGTCG ACGGCACAGT GCACGAAGTC GATGTCATCG TCTACGGAAC GGGCTTCGCG
GCCACGGATC TCCTCGCCTC CATCACCGTG CGAGGACTCA ACGGGCGGTC CTTGTCCGAA
GCCTGGAAGG AAGGCGCGCG GGCCCATCTC GGGATCACCG TGCCCGGCTT CCCGAATCTG
TTCTTGATGT ACGGCCCCAA CACCAATCTC GGCGGCGGAT CGATCATATA CATGCTGGAA
AGCCAGGCCC GCTACATCCG TAGCGCCGTT CAGTTCCTCC TCGCCCGCCC CGACCATTAC
CTCGACGTAC GGACCGAGGC CGAACAGCGA TGGGACGACG AGGTCCAGAG CCGACTCACC
CGCTCGGTGT GGACCCGCTG CAGCAGTTGG TACCGCAATG CCCAAGGGCG CGTGGTGTCC
AACTGGCCGG GCCGGACATC GGAGTATCGC TGGCGCACCC GCCGACTGGA TCCGGCCGAT
TTCCACGTCA TCCGGATCCA TCCCACACCA GGCACCCCCT CCGACACGCC ACCCACCGCG
GCGCCTGACA CAGCACCCGA TGCGGCATCC GACGCAGCGC TCGACCCGAC GTTCGACGCG
CCCACCGGGG CCGGCTAG
 
Protein sequence
MEIINTTVLI IGAGFGGVAT AIELRRAGIH DVVVLEAADD VGGVWRENTY PGAGCDVPSP 
LYSFSFAPNT QWPRRYALQP DILAYLRQVA RRFGVLGLVR FRSKVVSAEF DPDIARWRVR
TADGTTYLTR VLIPATGQLS QPVYPSIPGI DTFTGVSFHS ARWNHDCDLS GKRVAVIGTG
ASAVQFVPFL QREAASVAVF QRSAPYVLPR RDRVYTPRQH RLLRALPILQ KADRLGFWLY
TEFAQECLSR WQFFTPLFYF QARRHLRKQV ADPVLRKKLT PDYALGCKRV LFSNDYYPAL
TSSTVDVITE RIDAVTPKGI RTVDGTVHEV DVIVYGTGFA ATDLLASITV RGLNGRSLSE
AWKEGARAHL GITVPGFPNL FLMYGPNTNL GGGSIIYMLE SQARYIRSAV QFLLARPDHY
LDVRTEAEQR WDDEVQSRLT RSVWTRCSSW YRNAQGRVVS NWPGRTSEYR WRTRRLDPAD
FHVIRIHPTP GTPSDTPPTA APDTAPDAAS DAALDPTFDA PTGAG