Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_16340 |
Symbol | |
ID | 8386967 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 1682279 |
End bp | 1682989 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644975712 |
Product | hypothetical protein |
Protein accession | YP_003133496 |
Protein GI | 257055664 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0341913 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCGGG AAGCAGCGAA GCGGCGCCCC ACGCTGTCCA CCCTGCCCGC GCGGACCCCG GAACCGAGGG CCGTGGCGCT TGTGTTGCAC GGTGGTGCCG AGTACGGCGC CGAGATCGTC AGACCGTGGC GGTTGGCGTA TCTGCGGATG GTGCCGGTGG CGCATGCGAT CTGGGCGGCG GGGTCGCGGC TCGGCCTGGA GGTGCGGATA CTGCGCAACC GCGTGCGAGG CTGGAACGAG CCCGAACGCC ATCCGGTGCA CGACGCCCGG TGGGCGCTGG AGACCCTCAG GTCTGAACGA CCGGGCCTGC CGATCGCGCT GGTAGGCCAT TCGATGGGGG GACGTGTGGC GCTGCGGGTG TGCGCCGACG AGGCGGTACG CGGCGTGTGT GCGTTCGCAC CGTGGACGCC GCGCGACGAA CCGGTCGAAT CCGTGACCGG TCGGAGTGTG GTGATCGCCC ACGGCGCGCT CGATCGGGTG ACCCCGCCCG AGGATTCCTA CCGATACGCC GAACGTGCCG ACGCCCACGC CGCGCGGCTG ATCCGCTTCG AGGTCACCGC GGAGAACCAC GCGCTGCTGC GTAGGCCGAC GTTGTGGAAC AGGCTGGCCG CGGAGTTCTC GATGCAGGTC ACGGGATTGG TTCCGCCACA CGGCCTGTTG GAGCGCGCGT TCGCGCGAGA GTCACCCGAA CGCTGGCGCC TGCCACTGTG A
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Protein sequence | MSREAAKRRP TLSTLPARTP EPRAVALVLH GGAEYGAEIV RPWRLAYLRM VPVAHAIWAA GSRLGLEVRI LRNRVRGWNE PERHPVHDAR WALETLRSER PGLPIALVGH SMGGRVALRV CADEAVRGVC AFAPWTPRDE PVESVTGRSV VIAHGALDRV TPPEDSYRYA ERADAHAARL IRFEVTAENH ALLRRPTLWN RLAAEFSMQV TGLVPPHGLL ERAFARESPE RWRLPL
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