Gene Svir_16340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_16340 
Symbol 
ID8386967 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1682279 
End bp1682989 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content70% 
IMG OID644975712 
Producthypothetical protein 
Protein accessionYP_003133496 
Protein GI257055664 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0341913 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCGGG AAGCAGCGAA GCGGCGCCCC ACGCTGTCCA CCCTGCCCGC GCGGACCCCG 
GAACCGAGGG CCGTGGCGCT TGTGTTGCAC GGTGGTGCCG AGTACGGCGC CGAGATCGTC
AGACCGTGGC GGTTGGCGTA TCTGCGGATG GTGCCGGTGG CGCATGCGAT CTGGGCGGCG
GGGTCGCGGC TCGGCCTGGA GGTGCGGATA CTGCGCAACC GCGTGCGAGG CTGGAACGAG
CCCGAACGCC ATCCGGTGCA CGACGCCCGG TGGGCGCTGG AGACCCTCAG GTCTGAACGA
CCGGGCCTGC CGATCGCGCT GGTAGGCCAT TCGATGGGGG GACGTGTGGC GCTGCGGGTG
TGCGCCGACG AGGCGGTACG CGGCGTGTGT GCGTTCGCAC CGTGGACGCC GCGCGACGAA
CCGGTCGAAT CCGTGACCGG TCGGAGTGTG GTGATCGCCC ACGGCGCGCT CGATCGGGTG
ACCCCGCCCG AGGATTCCTA CCGATACGCC GAACGTGCCG ACGCCCACGC CGCGCGGCTG
ATCCGCTTCG AGGTCACCGC GGAGAACCAC GCGCTGCTGC GTAGGCCGAC GTTGTGGAAC
AGGCTGGCCG CGGAGTTCTC GATGCAGGTC ACGGGATTGG TTCCGCCACA CGGCCTGTTG
GAGCGCGCGT TCGCGCGAGA GTCACCCGAA CGCTGGCGCC TGCCACTGTG A
 
Protein sequence
MSREAAKRRP TLSTLPARTP EPRAVALVLH GGAEYGAEIV RPWRLAYLRM VPVAHAIWAA 
GSRLGLEVRI LRNRVRGWNE PERHPVHDAR WALETLRSER PGLPIALVGH SMGGRVALRV
CADEAVRGVC AFAPWTPRDE PVESVTGRSV VIAHGALDRV TPPEDSYRYA ERADAHAARL
IRFEVTAENH ALLRRPTLWN RLAAEFSMQV TGLVPPHGLL ERAFARESPE RWRLPL