Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_16330 |
Symbol | |
ID | 8386966 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 1680414 |
End bp | 1682282 |
Gene Length | 1869 bp |
Protein Length | 622 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644975711 |
Product | ABC-type multidrug transport system, ATPase and permease component |
Protein accession | YP_003133495 |
Protein GI | 257055663 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.867591 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACAACA CGTGGTCGCT GTTGCGAGGG GCGATGAAGT CGGCCGACGC CCCGAGTGGG CTGCGCAAGG GGACGGTACG CCGGGTGGCT CGTTTCGCCC GCCCGCACTG GCGGCGATTG CTCGTGTTCC TCCTGATCAC GGTGGTCACG GCCGTGCTGG CCGTGACCAC ACCTCTGCTG GCAGGTCGGG TGGTCGACGC CATCGTCGAC GGGCGTTCCG TCTCGACGGT GGTGTGGCTG GCCGTGGCCA TCGCGCTGAT CGCCGTGGTG GACGCCGGGC TCGGACTCGC GGAACGGTGG CAGTCCGCGC ACATCGGTGA GGGGCTCATC CTGGATCTGC GCAAAGCGGT GTTCGAGCAC GTCCAGCGCA TGCCGATCGC GTTCTTCCAA CGCAGCCGCA CCGGTGCGTT GGTGAGCAGG CTCAACAACG ACGTCATCGG CGCGCAGCGG ACCTTCACGG CCACGCTCTC CGGCTTGGTC ACGAACGTCA TCCAGTTGGT GCTCTCACTC GCGGTGATGC TGACCCTGTC GTGGCAGGTC ACCCTGCTGG CGCTCGTGCT GTTGCCGATG TTCGTGCTGC CCGCGCGGAG GGTGGGCAGG CGGATGGCCA CCTTGCAACG TGAGTCGGCC GAGCTCAACG CCGCCATGAC CAACCAGATG ACCGAGCGGT TCTCCGCGCC GGGCGCCACG TTGGTGAAGT TGTTCGGCAG GCCGCGGGTC GAGGTCGAGG AGTTCGGCAG ACGAGCGGGC CGCGTGCGGG ACATCGGAGT GCGTACCGCC ATGCTGACCC GCTGGTTCAT GACCAGCCTC ACCCTGGTGT CGGCGTTGGC GCAGGCTCTC GTCTACGGCC TCGGGGGATG GCTGGCGCTG ACGGGACGGA TCGATGCGGG GACGGTCGTC GCGCTGGCGT TGCTGCTCAC CCGCCTCTAC ACGCCGCTGA CGGCGTTGGC GAACGCACGG GTGGACGTCA TGACGGCCCT GGTCTCGTTT GAGCGGGTGT TCGAGATCCT GGACCTGCAG CCGATGATCA CCGAACGTCG CGATCCCACG CCGATTCCGG AGGGCGGGGT GTCGGTGGAG TTCGACGACG TACGGTTCGC CTATCCGCCG GCGGACGCCT TCTCCCTCGC CTCGCTCGAG GAAGTGTCCA CTCTCGACGA TCGAGGTGGG GAGCCGGTGC TGCACGGTGT GAGCTTCCGT GCCGAACCGG GGCAGATGGT GGCGCTCGTC GGGCCGTCCG GTGCGGGCAA GTCCACCATC GCCTCGCTGG TGGCACGGCT GTACGACGTG GATTCCGGTG CCGTGCGGTT GTCCGGCGTG GATGTGCGGG ACACCTCGTT CGCGGCACTG CGCAGTACCG TGGGATTCGT CACGCAGGAC GGGCACCTGT TCCACGACAC CATTCGGGCC AATCTCGCCT ACGCGCGGCC TGAGGCCACC GACGCCGAGA TCTGGGAGGT GCTGCGGCGT GCCCGACTGG AGGACCTCGT CCGCTCGCTG CCCGACGGGC TGGACACCGT GGTGGGCGAA CGCGGCTACC GGCTTTCCGG TGGGGAGCGG CAACGGCTGA CGATCGCGCG GTTGTTGCTC GCCCGTCCGC GCGTGGTGGT ACTGGACGAG GCCACTGCCC ACCTGGACTC CGAGTCCGAG GCCGCGGTCT CGGAGGCGTT GGCCGACGCG TTGCAAGGAC GCACGGCGTT GGTCATCGCT CATCGGCTGT CCACGGTGCG TGCGGCCGAC CAGATCCTCG TGATCGAGGA CGGGCGTATC GTCGAGCGCG GTACGCATTC CGAGTTGCTC GCCCACGGCG GCCGGTACGC CGAGCTGCAC CGCACCCAGT TCGACCTCGG CGAACGGTCG GCGGCATGA
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Protein sequence | MDNTWSLLRG AMKSADAPSG LRKGTVRRVA RFARPHWRRL LVFLLITVVT AVLAVTTPLL AGRVVDAIVD GRSVSTVVWL AVAIALIAVV DAGLGLAERW QSAHIGEGLI LDLRKAVFEH VQRMPIAFFQ RSRTGALVSR LNNDVIGAQR TFTATLSGLV TNVIQLVLSL AVMLTLSWQV TLLALVLLPM FVLPARRVGR RMATLQRESA ELNAAMTNQM TERFSAPGAT LVKLFGRPRV EVEEFGRRAG RVRDIGVRTA MLTRWFMTSL TLVSALAQAL VYGLGGWLAL TGRIDAGTVV ALALLLTRLY TPLTALANAR VDVMTALVSF ERVFEILDLQ PMITERRDPT PIPEGGVSVE FDDVRFAYPP ADAFSLASLE EVSTLDDRGG EPVLHGVSFR AEPGQMVALV GPSGAGKSTI ASLVARLYDV DSGAVRLSGV DVRDTSFAAL RSTVGFVTQD GHLFHDTIRA NLAYARPEAT DAEIWEVLRR ARLEDLVRSL PDGLDTVVGE RGYRLSGGER QRLTIARLLL ARPRVVVLDE ATAHLDSESE AAVSEALADA LQGRTALVIA HRLSTVRAAD QILVIEDGRI VERGTHSELL AHGGRYAELH RTQFDLGERS AA
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