| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_16260 |
|---|
| Symbol | |
|---|
| ID | 8386959 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | - |
|---|
| Start bp | 1672177 |
|---|
| End bp | 1673064 |
|---|
| Gene Length | 888 bp |
|---|
| Protein Length | 295 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 644975704 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003133488 |
|---|
| Protein GI | 257055656 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3246] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAACG AAGTGATCAT CACCTGCGCG TTGACCGGCG CGGGTGACAC GGTGGGCAAG
AGCGAACACG TCCCCGTGAC ACCGGAGCAG ATAGCCGCTT CCGCGATCGA GGCGGCGAAC
GCCGGAGCGG CCGTGGTGCA CATCCATGTG CGAGACGTCG AGACGGGCCA GGGGTCCCGG
GACGTCACAC TGTACCGGGA GGTGGTGCGT CGTATCCGCG AGTCCGGAGT GGATGTCGTA
CTCAATCTCA CCGCCGGAAT GGGCGGTGAC CTCGTGCTCG ACGGCGAGGA CCCACTCAAA
CCCGTCGACG GCACCGACCT CGTGAACGCC CTGGACCGGC TCCCGCACGT CGAGGAATTA
CTCCCCGAGA TCTGCACACT CGACTGCGGT TCACTCAACT TCGGCGAGGG AAACCAGCTC
TACGTGTCAA CCCCGGACAT GCTCCGTGTC GGGGCACGGC GCATCCAGGA ACTCGGTGTG
AAACCGGAGC TGGAGATCTT CGACACCGGG AACCTCTGGT TCGCCACCAA GCTCGTCGAG
GAGGGGCTGA TCGACGCGCC GCCGCTGTTC CAACTGTGCA TGGGCATCCC GTACGGCGCC
CCTCCGAACC CGAAGCTGCT CCAGGTGATG GTCGACATGT TGCCCGAGGG CGCGCAATGG
GCGTCGTTCG CCATCGGCCG GCACCAACTG CCCTGGGTGG CGGAGTCCGT GTCGCGCGGT
GGTCACGTCC GTGTGGGACT GGAGGACAAC CTCTACCTGT CCAAGGGGGT CAAAGCCACG
AACGGCCAAC TGGTGGAGCG CGCGGTACGC ATCGTGGAGG ACCTCGGCGC GACGGTGGCC
GGCCCGGACA CGGCCCGCCG CATCCTCGGA TTGAAGGCCG CGCGATGA
|
|---|
| Protein sequence | MNNEVIITCA LTGAGDTVGK SEHVPVTPEQ IAASAIEAAN AGAAVVHIHV RDVETGQGSR
DVTLYREVVR RIRESGVDVV LNLTAGMGGD LVLDGEDPLK PVDGTDLVNA LDRLPHVEEL
LPEICTLDCG SLNFGEGNQL YVSTPDMLRV GARRIQELGV KPELEIFDTG NLWFATKLVE
EGLIDAPPLF QLCMGIPYGA PPNPKLLQVM VDMLPEGAQW ASFAIGRHQL PWVAESVSRG
GHVRVGLEDN LYLSKGVKAT NGQLVERAVR IVEDLGATVA GPDTARRILG LKAAR
|
|---|
| |