| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_16220 |
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| Symbol | |
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| ID | 8386955 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 1668239 |
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| End bp | 1669195 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644975700 |
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| Product | ABC-type dipeptide/oligopeptide/nickel transport system, permease component |
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| Protein accession | YP_003133484 |
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| Protein GI | 257055652 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.270371 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCCGAT TGATCCTTCG CCGGCTGCTC GCCAGCATCG TGGTGCTCTG GTCGGTGACC
CTGCTGGTGT TCGTGGCGAC CCTGTTGCTG CCGGGTGACC CGGCCCGGGC GATCCTCGGC
CAACAGGCAA CCCCTGAACG CATCGCCGCG CTACGTGAGC AGCTCGGACT CGACGACCCC
GTGTGGCAGC GTTACCTCGA CTGGCTGGGT GGAGTGCTGA CCGGTGATCT GGGTACTTCC
ACGGCCACGC AGGGCTCGGT GAACGAGCTG CTCGCGGATC GCATCCCCGC CTCCGGGCTG
CTGCTCGTCG CGGCCGCCGT GCTGAGCACC GTGGCCGGGT TGCTACTCGG CACGTGGAGT
GCCCTGCGCC GGGGTCGAAC CGCGGATCAC ACCGTGTCCG CGCTCAGTCT CGTCGTCGCC
GCCCTGCCCG AGTTCGTGAT CGGTGTCGCG CTCGTGGTGG TGCTGTCGAC GACCGTGTTC
CGGGTTCTGC CCTCGGTGAC GTTGACCCGG CCCGACGAAC CCGTGTGGGC ACATCCCGAA
CAACTCGTGC TACCCGTGCT CACACTCGCA CTGGTCGTCA CGCCGTACAT CACCCGTATG
ATGCGCGCGA CGATGAGTGA GGTCCTCGAC AGCGGCTACG TCGAGATGGC CCGGCTCAAG
GGGCTGCCCG AACGCGTCGT GCTCACCCGA CACGCGTTGC CACACGCGAT CGGTCCCGTG
GCGCAGGTCA TCGCGCTGCA GCTCGCCTGG CTCGCCGGTG GCGTAGTGGT GGTCGAGTTC
CTGTTCCGCT ACCCCGGCAT CGGAGCGGCC CTGATCGACG CGGTCAACAA CCGGGATGTC
GAAGTGGTCC AGGCGATCAC CCTGCTCATC GCGGGTGTCT ACGTGGTCGT CAACCTCATC
GCCGACGTGC TCGGCGTCCT CGTCGACCCC AAGCAACGCA CGGGAGTGTC CTCATGA
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| Protein sequence | MTRLILRRLL ASIVVLWSVT LLVFVATLLL PGDPARAILG QQATPERIAA LREQLGLDDP
VWQRYLDWLG GVLTGDLGTS TATQGSVNEL LADRIPASGL LLVAAAVLST VAGLLLGTWS
ALRRGRTADH TVSALSLVVA ALPEFVIGVA LVVVLSTTVF RVLPSVTLTR PDEPVWAHPE
QLVLPVLTLA LVVTPYITRM MRATMSEVLD SGYVEMARLK GLPERVVLTR HALPHAIGPV
AQVIALQLAW LAGGVVVVEF LFRYPGIGAA LIDAVNNRDV EVVQAITLLI AGVYVVVNLI
ADVLGVLVDP KQRTGVSS
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