Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_16100 |
Symbol | |
ID | 8386943 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 1655475 |
End bp | 1656401 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644975688 |
Product | ABC-type multidrug transport system, ATPase component |
Protein accession | YP_003133472 |
Protein GI | 257055640 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.252835 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACGCAA CGGCCGTCGA AATCACCGGG CTGGTGAAAC GGTTCGGCGC CGTCACGGCC GTTTCCGGCC TCGACTTGAC GATGCCCCGA GCCACAGTGC TCGCCCTGCT CGGTCCCAAC GGAGCGGGCA AGACGACCAC CGTCGAGATC TGCGAAGGCT TCCAACGCCC CGACGAGGGC ACCGTACGGG TCCTCGGCCT CGACCCTGTA CGCGACGGAG CCGCGCTGCG CCCGAAGATC GGCGTCATGC CTCAGGGCGG GGGAGCCTAC CCCGGCGTCC GCGCCGAGGA GATGCTCCGG CTCGTGGCGT CGTGCGCCGC CAACCCCCTG GACCCGGCGT GGCTGCTCGA CGTGCTCGGC CTCTCGGACG TGCGCCGCGT CCCGTTCAAG CGACTGTCCG GGGGACAGCA GCAACGGTTG TCGCTGGCGT GCGCTCTCGT CGGGCGTCCG GAGCTGGTGT TCCTCGACGA ACCGACGGCC GGCATGGATC CCCAGGCCCG ACGCCTGGTG TGGGATCTGC TCACCGCCCT GCGCGCCGAC GGCGTGAGCG TGCTGCTCAC CACACACCTC ATGGAGGAGG CCGAGGCACT GGCCGACACG GTGGTGATCG TCGACGGCGG TCGAGCGATC GCCTCGGGTT CGCCGAGCTC CCTCACCGCC GAGCACGCCG AGGACGCACA GCTTCGGTTC CGCGCACGAC CGGGCCTCGA CACCGACCTG CTCGCCGCCG CGTTGCCCGA GGGCTACCTC GTCAAGGAGT CCTCCCCCGG CGTCTACCGG GTGTACGGCG CGGTGAATCC GCAGGTGATC TCCACGGTGA CGTCATGGTG CGCCCAGCAG GGTGTGCTCG CGGAAGAGCT GCATGTCGGC AAACGGGATC TGGAGGAAGT CTTCCTCGAA CTCACCGGAC GGGAGCTACG CGCGTGA
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Protein sequence | MNATAVEITG LVKRFGAVTA VSGLDLTMPR ATVLALLGPN GAGKTTTVEI CEGFQRPDEG TVRVLGLDPV RDGAALRPKI GVMPQGGGAY PGVRAEEMLR LVASCAANPL DPAWLLDVLG LSDVRRVPFK RLSGGQQQRL SLACALVGRP ELVFLDEPTA GMDPQARRLV WDLLTALRAD GVSVLLTTHL MEEAEALADT VVIVDGGRAI ASGSPSSLTA EHAEDAQLRF RARPGLDTDL LAAALPEGYL VKESSPGVYR VYGAVNPQVI STVTSWCAQQ GVLAEELHVG KRDLEEVFLE LTGRELRA
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