Gene Svir_16100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_16100 
Symbol 
ID8386943 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1655475 
End bp1656401 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content70% 
IMG OID644975688 
ProductABC-type multidrug transport system, ATPase component 
Protein accessionYP_003133472 
Protein GI257055640 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.252835 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACGCAA CGGCCGTCGA AATCACCGGG CTGGTGAAAC GGTTCGGCGC CGTCACGGCC 
GTTTCCGGCC TCGACTTGAC GATGCCCCGA GCCACAGTGC TCGCCCTGCT CGGTCCCAAC
GGAGCGGGCA AGACGACCAC CGTCGAGATC TGCGAAGGCT TCCAACGCCC CGACGAGGGC
ACCGTACGGG TCCTCGGCCT CGACCCTGTA CGCGACGGAG CCGCGCTGCG CCCGAAGATC
GGCGTCATGC CTCAGGGCGG GGGAGCCTAC CCCGGCGTCC GCGCCGAGGA GATGCTCCGG
CTCGTGGCGT CGTGCGCCGC CAACCCCCTG GACCCGGCGT GGCTGCTCGA CGTGCTCGGC
CTCTCGGACG TGCGCCGCGT CCCGTTCAAG CGACTGTCCG GGGGACAGCA GCAACGGTTG
TCGCTGGCGT GCGCTCTCGT CGGGCGTCCG GAGCTGGTGT TCCTCGACGA ACCGACGGCC
GGCATGGATC CCCAGGCCCG ACGCCTGGTG TGGGATCTGC TCACCGCCCT GCGCGCCGAC
GGCGTGAGCG TGCTGCTCAC CACACACCTC ATGGAGGAGG CCGAGGCACT GGCCGACACG
GTGGTGATCG TCGACGGCGG TCGAGCGATC GCCTCGGGTT CGCCGAGCTC CCTCACCGCC
GAGCACGCCG AGGACGCACA GCTTCGGTTC CGCGCACGAC CGGGCCTCGA CACCGACCTG
CTCGCCGCCG CGTTGCCCGA GGGCTACCTC GTCAAGGAGT CCTCCCCCGG CGTCTACCGG
GTGTACGGCG CGGTGAATCC GCAGGTGATC TCCACGGTGA CGTCATGGTG CGCCCAGCAG
GGTGTGCTCG CGGAAGAGCT GCATGTCGGC AAACGGGATC TGGAGGAAGT CTTCCTCGAA
CTCACCGGAC GGGAGCTACG CGCGTGA
 
Protein sequence
MNATAVEITG LVKRFGAVTA VSGLDLTMPR ATVLALLGPN GAGKTTTVEI CEGFQRPDEG 
TVRVLGLDPV RDGAALRPKI GVMPQGGGAY PGVRAEEMLR LVASCAANPL DPAWLLDVLG
LSDVRRVPFK RLSGGQQQRL SLACALVGRP ELVFLDEPTA GMDPQARRLV WDLLTALRAD
GVSVLLTTHL MEEAEALADT VVIVDGGRAI ASGSPSSLTA EHAEDAQLRF RARPGLDTDL
LAAALPEGYL VKESSPGVYR VYGAVNPQVI STVTSWCAQQ GVLAEELHVG KRDLEEVFLE
LTGRELRA