| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_16070 |
|---|
| Symbol | |
|---|
| ID | 8386940 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | - |
|---|
| Start bp | 1652339 |
|---|
| End bp | 1653295 |
|---|
| Gene Length | 957 bp |
|---|
| Protein Length | 318 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644975685 |
|---|
| Product | Delta-9 acyl-phospholipid desaturase |
|---|
| Protein accession | YP_003133469 |
|---|
| Protein GI | 257055637 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1398] Fatty-acid desaturase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAGCA GCACCATGCC CACGTCCACC GGACGACGCA CCGGGCCGAA GCCCCTTGTC
GGGCACGAAC GCTCCACCGC ACAGATGATC GTGTTGAAGA CATTCCTGTT GATCCCGTTC
GTCGCGCTGG TCGCGGCGAT CCCCTTCGCG TGGGGGTGGG GGTTGACCTG GGTGGACCTC
GCGCTCGCCG CGGTGTTCTA CACCATCGGC ACACTCGGCG TCACCGTCGG CTATCACCGC
TACTTCACGC ACGGAGCGTT CAAGACCACC AGGCCCTTAC GCATCGCTCT CGCCATCGCC
GGCAGCATGG CCGTGCAGGG TTCGGTGCTC TTCTGGGTGG CGAGCCATCG CCGGCACCAC
GCCTTCGCCG ACAAAGAGGG CGATCCGCAT TCCCCGTGGT TGTTCGGCAC CTCACCGTGG
GCGCTGCTGC GTGGTTTCTG GCACGCGCAC ATGGGTTGGA TGTTCAAACG CGAGGTCACG
AACTACGAGC GGTTCGCACC CGACCTGTTG TCCGACAAGG ACCTGCAGGT CGTCAACCGT
TACTTCTGGC TGTGGATCGT GCTGAGCCTC GCACTGCCCA CCCTGCTCGG CGGGCTCATC
ACGTGGTCGT GGTGGGGTGC GGTGACGGCC TTCTTCTGGG CCGGACTCGT GCGTATCGCG
TTCTCCCACC ACGTCACGTG GTCGGTGAAC TCGATCTGTC ATCTGGTGGG TGAACGCCCG
TTCACCAGCA GGGACAAGGC CACGAACTTC TGGCCTCTGG CGATCCTGTC GATGGGTGAG
TCCTGGCACA ACAGCCACCA CGCCGACCCG ACCTGCGCCC GACACGGTGT CCTGCGCGGT
CAGATCGACA TCTCCGCGCG ACTGATCTGG ATCTTCGAGA AGTTGGGGTG GGCGCACAAC
GTGCGCTGGC CCAAACCGGA ACGAATCGCC GCCAAACGCG CCGTACCGGC GGCGTAG
|
|---|
| Protein sequence | MSSSTMPTST GRRTGPKPLV GHERSTAQMI VLKTFLLIPF VALVAAIPFA WGWGLTWVDL
ALAAVFYTIG TLGVTVGYHR YFTHGAFKTT RPLRIALAIA GSMAVQGSVL FWVASHRRHH
AFADKEGDPH SPWLFGTSPW ALLRGFWHAH MGWMFKREVT NYERFAPDLL SDKDLQVVNR
YFWLWIVLSL ALPTLLGGLI TWSWWGAVTA FFWAGLVRIA FSHHVTWSVN SICHLVGERP
FTSRDKATNF WPLAILSMGE SWHNSHHADP TCARHGVLRG QIDISARLIW IFEKLGWAHN
VRWPKPERIA AKRAVPAA
|
|---|
| |