| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_15980 |
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| Symbol | |
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| ID | 8386931 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 1640623 |
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| End bp | 1642722 |
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| Gene Length | 2100 bp |
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| Protein Length | 699 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644975676 |
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| Product | transketolase |
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| Protein accession | YP_003133460 |
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| Protein GI | 257055628 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0021] Transketolase |
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| TIGRFAM ID | [TIGR00232] transketolase, bacterial and yeast |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0310968 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCGGAGA TTGCCGCTAC GGAGAACAAC CCACTGTTGC GTCGGAACTA CCCGGCCGAC
TGGACGGATC TGGACACCCG CGCGGTGGAC ACGATCCGCG TGCTGGCGGC CGACGCCGTC
GAACACTGTG GCAGCGGACA CCCCGGCACA GCCATGAGCT TGGCGCCGGT GGCGTACTCC
TTGTTCCAGC GCATCATGCG CCATGACCCC GCGGATCCGG AGTGGCCGGC CCGGGACCGG
TTCATCCTCT CGGCCGGACA CAGCAGCCTC ACGCTGTACC TCCAGCTGTT CCTCGCCGGC
TACGGCCTGG AGATGGAGGA CATCAAGCAG CTTCGTAAGT GGGGGTCGAA GACACCCGGC
CACCCGGAGT ACCGCCACAC CCCGGGTGTG GAGACCACGA CGGGACCGCT GGGTCAGGGG
TTGGCCAACG CCGTGGGTAT GGCCATGGCG GCCCGCCGGG AGCGTGGGCT GCTCGACCCG
GACACCCCGC AGGGGGAAAG CCCGTTCGAC CACCACATCT ACGTGATCGC CTCCGACGGT
GACATCCAGG AGGGCGTGAC GGCCGAGGCG TCGTCTTTGG CGGGCCGGCA GGAACTCGGC
AATCTGATCG TCATCTACGA CGACAACAAG ATCTCCATCG AGGACGACAC CAACATCGCC
TTCTCCGAGG ACACCGCCAA GCGTTACGAG GCGTACGGCT GGCACGTCCA GGTCGTCGAG
GGCGGCGAGG ACGTCGCGGC CTTCGAGCAG GCCATCGAGG CCGCGAAGGC CGAGACCACC
CGGCCGTCGT TCATCGTGCT GCGCACCGTG ATCGGCTATC CAGCGCCGAA CAAGATGAAC
ACCGGTAAGG CCCACGGCGC TGCGCTCGGC GCCGACGAGG TGGCCGCCGT CAAGGAGATC
CTCGGCTTCG ACCCCAAGGT CAGCTTCCAC ATCGACGACG AGGTGCTCGC CCACACCCGC
AAGGTGAAGG AGCGTGCACG TGCCGCTCGC GAGCAGTGGC AGCAGGCCTT CGACGCCTGG
GCGCAGGCCA ACCCGGAGCG GAAGGAGCTC GCCGACCGGC TCCGGACCCG CTCGCTTCCC
GAGGGGTGGG CCGAGAAGCT CCCGAGCTGG GAACCCGACC CGAAGGGTCT TGCGACCCGG
AAGGCGTCCG GGGAGGTCCT CAACGCCATC GGCGATGCGC TGCCCGAACT GTGGGGTGGC
TCCGCCGACC TGGCCGAGAG CAACAACACC CTCATCAAGA ACTCGGACTC GTTCGGCCCC
GAAAGCGCCT CCACCGACAT GTTCACCGCC CACCCCTACG GCAGGAACCT GCACTTCGGG
GTGCGTGAAC ACGCGATGGG CGCGATCCTC AACGGCATCG CCCTCCACGG AGGCACCCGC
CCCTACGGCG CCACGTTCCT CATCTTCAGC GACTACATGC GGCCTTCCGT CCGCCTCGCG
GCGCTGATGA AGGCCCCCGT GATCTACGTG TGGACGCACG ATTCGATCGG CCTCGGTGAG
GACGGGCCCA CCCACCAGCC GGTCGAACAG TTGGCCTCGC TGCGCGCGAT CCCCGGTCTG
AACGTCGTTC GCCCCGCCGA CGCCAACGAA ACGGCCGCGG CGTGGAAGGC GGCGCTGGAG
GACGTCCACA ACCCCACGGG CCTGGCACTG ACCCGACAGA ACGTGCCGGT GCTGGAGGGC
ACCAGCGCCG AAGGCGTCGC CAAGGGCGGC TACGTGCTGG CCGAGGCCTC CAACGGCTCC
CCCGAGGTCG TGCTGATCGC CACGGGCTCG GAGGTGCAGC TCGCGGTGGA GGCCCGCAAG
GTGCTCGAAG CCGAGGGAGT GCCCGCCAGC GTGGTGTCGA TGCCGTGCGT GGAGTGGTTC
GACCGGCAGG ACCAGGAGTA CCGCGACGCG GTTCTCCCCC CGACCGTCAA GGCCCGCGTC
ATCGTCGAGG CCGGGACGGC CCAGCCGTGG TACCGGTTCG CGGGCGAGGC GGGCGAGATC
ATCTCGATCG AGCAGTTCGG CGCCTCGGCG GACTACAACA CGTTGTTCGA GAAGTTCGGG
TTCACCACCG AAGCCGTGGT GGAGGCCGCC CGTCGGTCGC TGGCGAAGGC GAAGAGCTGA
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| Protein sequence | MSEIAATENN PLLRRNYPAD WTDLDTRAVD TIRVLAADAV EHCGSGHPGT AMSLAPVAYS
LFQRIMRHDP ADPEWPARDR FILSAGHSSL TLYLQLFLAG YGLEMEDIKQ LRKWGSKTPG
HPEYRHTPGV ETTTGPLGQG LANAVGMAMA ARRERGLLDP DTPQGESPFD HHIYVIASDG
DIQEGVTAEA SSLAGRQELG NLIVIYDDNK ISIEDDTNIA FSEDTAKRYE AYGWHVQVVE
GGEDVAAFEQ AIEAAKAETT RPSFIVLRTV IGYPAPNKMN TGKAHGAALG ADEVAAVKEI
LGFDPKVSFH IDDEVLAHTR KVKERARAAR EQWQQAFDAW AQANPERKEL ADRLRTRSLP
EGWAEKLPSW EPDPKGLATR KASGEVLNAI GDALPELWGG SADLAESNNT LIKNSDSFGP
ESASTDMFTA HPYGRNLHFG VREHAMGAIL NGIALHGGTR PYGATFLIFS DYMRPSVRLA
ALMKAPVIYV WTHDSIGLGE DGPTHQPVEQ LASLRAIPGL NVVRPADANE TAAAWKAALE
DVHNPTGLAL TRQNVPVLEG TSAEGVAKGG YVLAEASNGS PEVVLIATGS EVQLAVEARK
VLEAEGVPAS VVSMPCVEWF DRQDQEYRDA VLPPTVKARV IVEAGTAQPW YRFAGEAGEI
ISIEQFGASA DYNTLFEKFG FTTEAVVEAA RRSLAKAKS
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