| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_15920 |
|---|
| Symbol | |
|---|
| ID | 8386925 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | - |
|---|
| Start bp | 1632780 |
|---|
| End bp | 1633883 |
|---|
| Gene Length | 1104 bp |
|---|
| Protein Length | 367 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644975670 |
|---|
| Product | signal transduction histidine kinase |
|---|
| Protein accession | YP_003133454 |
|---|
| Protein GI | 257055622 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4585] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.573387 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.89616 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTTCGCGA GACGCCCTGC CCTCACCGGT ATCGCGACGG ATCTGGCTTT CGTCGTCATC
GCGGTGCTGG ACGTGTGGCT GGTGGTTCCC GAGCAAGCAC CGCCGTATTC CGTGTACCTG
TCCGCCGCCA GTTGTGTGGC ACTGCTGTTG CGCCGCCGCT TCCCGTTCAC CGCGGTCGTG
CTCGCCGTTC CCGGTTTCTT CGCGGGCTGG GCCCAGTTGG CCGCCATGTT CGCGTTGGGA
TACCTCGCAC GCCGTAAGCC GTTCCACTGG CACATGTGGG TGGGGGCCGG TCTGGTGTGG
CTGTGCCGGT TCATACTCTG GCCGCTGGCC GATTTCTTCG ATCTCACCTG GCGCATGCAC
ATCCTCGACG CCATCTACGG CGTGATCGTG GCGGGCATGC CGGTGGCGAT CGGTTTGCTC
ATCCAGGCGA GGGCGGAACT GGCCGCGCGT CTGGCGGAAC TTGCGGAAAG CCGGGACCGG
GAACGACAAC TTCATACACA AGCGGTGCGG GCCGAGGAGC GGGCCCGACT GGCGAGGGAA
ATGCATGACG TGGTGTCCCA CGACATCACC CTCATCGCCA TGCAGGCGGG GGTGTTGTGC
GCGGCCGACA CCGACCCGGA GGCCAAAAAG ACCGCCGACA CGATCCGCAC GCTGAGCAGA
CGCACCTTGG AGGAGCTGCG GGGGCTTGTG GGTGTGTTGC GGTCGGGCTC CGACATGACC
GTCCAAGCGG ATCTGGACAA TCTCGACGAG CTCATACGTC ATGCCGGTGT TCCGGTGAGA
GTGTCGGTGG AGAACCTGCC GAGCTCACTG CCACGCCAGG TCTCGGCGGC GGCCTACCGC
ACGGTGCAGG AGGCGTTGAC CAACGTCCGT AAGCACGCGC CGGGGGCCAC CGCGTTCGTG
CACATCTCCG CGTCCAACGA CACGCTTTCC GTGGAAGTGC GCAACGACCG CCCCAACGCC
CGCCGTAATC CCGCGCTGCC TCCCGGTGGC GGCTACGGCC TCGCCGGGCT CGCCGAACGC
GCCAAACTCC TCGGAGGCAC GTTCGACGCC GAATGCACCG ACGACGGTGG GTTCCGAATC
CGGGCCCGCT ATCCGCTCAC CTAA
|
|---|
| Protein sequence | MFARRPALTG IATDLAFVVI AVLDVWLVVP EQAPPYSVYL SAASCVALLL RRRFPFTAVV
LAVPGFFAGW AQLAAMFALG YLARRKPFHW HMWVGAGLVW LCRFILWPLA DFFDLTWRMH
ILDAIYGVIV AGMPVAIGLL IQARAELAAR LAELAESRDR ERQLHTQAVR AEERARLARE
MHDVVSHDIT LIAMQAGVLC AADTDPEAKK TADTIRTLSR RTLEELRGLV GVLRSGSDMT
VQADLDNLDE LIRHAGVPVR VSVENLPSSL PRQVSAAAYR TVQEALTNVR KHAPGATAFV
HISASNDTLS VEVRNDRPNA RRNPALPPGG GYGLAGLAER AKLLGGTFDA ECTDDGGFRI
RARYPLT
|
|---|
| |