| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_15870 |
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| Symbol | |
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| ID | 8386920 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 1628951 |
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| End bp | 1629955 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644975665 |
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| Product | glyceraldehyde-3-phosphate dehydrogenase |
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| Protein accession | YP_003133449 |
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| Protein GI | 257055617 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase |
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| TIGRFAM ID | [TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0000589775 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGGTTC GCGTAGGGGT CAACGGCTTC GGCCGTATCG GCCGTAACTT TTTCCGTGCC
GTGCAGGCCA GCGATCACGA CATCGAGATC GTCGCCTTCA ACGACCTCGG TGACGTCGCC
ACGATGGCTC ATCTGCTCAA GTACGACAGC ATCCTGGGCC CGTTGAGCGA AGAGGTCAGT
GTCAGCGACG AGGGCATCGT CGTCGGTGGC AAGACGGTCA AGGCGCTGGC CGAGCGCGAT
CCCGCCAAAC TCCCCTGGGG CGACCTCGGT GTGGACGTCG TCGTCGAATC CACCGGTTTC
TTCACCAAGG CCGACGACGC CAAGGCCCAC CTCGACGGTG GAGCCAAGAA GGTCATCATC
TCCGCGCCGG CCAAGGGCGA GGACCTCACC GTCGTCCTCG GGGTCAACGA CTCCGCCTAC
GACGGGTCGC AGAACATCAT CTCGAACGCC TCGTGCACCA CGAACTGCCT CGCTCCGCTG
GCGAAGGTGC TGCACGACGA GTTCGGCATC GAGCAGGGCC TGATGACCAC GATCCACGCC
TACACGCAGG ACCAGAACCT GCAGGACGGG CCGCACAAGG ACCTGCGTCG GGCTCGTGCC
GCCGCGCTGA ACATCGTGCC GACCTCCACC GGCGCGGCCA AGGCCATCGG CCTGGTGCTG
CCGGAGCTGA ACGGCAAGCT CGACGGCTAC GCGCTGCGGG TGCCGGTTCC CACCGGCTCC
ACCACCGACC TGACCGTGAC GCTGTCGAAG AGCGCGTCGG TGGACGACAT CAACGCCGCG
TACAAGGCTG CCGCCGAGGG GCCGTTGAAG GGCATCCTGC GGTACAGCGA GGAGCCCATC
GTGTCCGCCG ACATCGTCAC CGACCCCGCG TCGTGCATCT ACGACGCGCC GCTGACCAAG
GTCATCGGCA ACCAGGTGAA GGTCGTCGGT TGGTACGACA ACGAGTGGGG CTACTCGAAC
CGCCTCGCGG ACCTGGTCAA GCTCGTCGGT ACGAAGCTGT CCTGA
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| Protein sequence | MTVRVGVNGF GRIGRNFFRA VQASDHDIEI VAFNDLGDVA TMAHLLKYDS ILGPLSEEVS
VSDEGIVVGG KTVKALAERD PAKLPWGDLG VDVVVESTGF FTKADDAKAH LDGGAKKVII
SAPAKGEDLT VVLGVNDSAY DGSQNIISNA SCTTNCLAPL AKVLHDEFGI EQGLMTTIHA
YTQDQNLQDG PHKDLRRARA AALNIVPTST GAAKAIGLVL PELNGKLDGY ALRVPVPTGS
TTDLTVTLSK SASVDDINAA YKAAAEGPLK GILRYSEEPI VSADIVTDPA SCIYDAPLTK
VIGNQVKVVG WYDNEWGYSN RLADLVKLVG TKLS
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