Gene Svir_15860 details

Gene Information

• Locus tag: Svir_15860
• ID: 8386919
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Saccharomonospora viridis DSM 43017
• Kingdom: Bacteria
• Replicon accession: NC_013159
• Strand: +
• Start bp: 1628197
• End bp: 1628667
• Gene Length: 471 bp
• Protein Length: 156 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 644975664
• Product: polyketide cyclase / dehydrase family protein
• Protein accession: YP_003133448
• Protein GI: 257055616
• COG category: [S] Function unknown
• COG ID: [COG5637] Predicted integral membrane protein

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 0.00215892
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: 32
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

GTGAGCACGG TGATGAAGGC GGTCGACGTG GATGTTCCGC TGTCCACCGC GTACAACCAA 
TGGACCCAGT TCGAGTCGTT CCCGGAGTTC ATGGAGGGTG TCGAAGAGGT TCGGCAGTTG 
GACGACACGC ACACCCATTG GGTGACCCGG GTCGGGGGTG TCACGCGCGA GTTCGACGCG 
ACGATCACCG AGCAACACCC TGACGAGCGG GTCGCCTGGA CCTCGGAATC CGGGCCGCGG 
CACGCCGGTG TGATCACATT CCATCGGCTC GGGCCGAGCC GCACCCGGGT CACGGCGCAG 
ATGGACATCG ATCCGGACGG TTTCCTGGAG CAGGTGGCCG ACAAGACCGG GATGCTGGGC 
AAGCGCGTCA ACGGCGACAT GCACCGGTTC AAGGAGTTCA TCGAGCGCCG CGGGCACGAG 
ACCGGTGGCT GGCGCGGTGA CATCGACACC CCGCCCACGG CGGGGACGTG A 

 

Protein sequence

MSTVMKAVDV DVPLSTAYNQ WTQFESFPEF MEGVEEVRQL DDTHTHWVTR VGGVTREFDA 
TITEQHPDER VAWTSESGPR HAGVITFHRL GPSRTRVTAQ MDIDPDGFLE QVADKTGMLG 
KRVNGDMHRF KEFIERRGHE TGGWRGDIDT PPTAGT