| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_15820 |
|---|
| Symbol | |
|---|
| ID | 8386915 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | + |
|---|
| Start bp | 1625845 |
|---|
| End bp | 1626876 |
|---|
| Gene Length | 1032 bp |
|---|
| Protein Length | 343 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644975660 |
|---|
| Product | putative glucosyl-3-phosphoglycerate synthase |
|---|
| Protein accession | YP_003133444 |
|---|
| Protein GI | 257055612 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.0138111 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGACACGA CAAGGATCGG CCTGAGCGCC GATAACGCCG ATCTGGGTTT CTCCTCCCGG
GTTCGTTCCT GGTTGCGGCA CCGGTCCGCT CGCGCCGACG ACTGGACGGC CTCCGAACTG
TGTGCCCTCA AAGGGGAGCG CACGGTGACC GTCGTCATCC CGGCGCGTGA TGAGGAGCGT
ACGGTGGGTC GGATCGTGAA GACGATCCGC ACGGCGTTGA TGGAGGAGTA CCCGCTCGTC
GACGATGTGC TGGTCGTCGA TTCGCGTTCT CGCGACAACA CGGCGCGGGT GGCTGCGGAG
GCCGGGGCCA GGGTCGTGGC GCAGGACACC GTGTTGCAAC CGTTGCCGGA CATGCACGGT
AAGGGTGAGG CGTTGTGGAA AGGGCTCGCC GCCACCACCG GCGATCTCGT GGTGTTCGTG
GATGGCGATC TTTACGACTT CACCGCGGAG TACGTGATCG GGCTTCTCGG TCCGTTGCTC
ACCGATCCCG GCGTGGACTA CGTGAAGGGG TTCTACCAGC GGCCGCTGGT CCACGGTTCT
CAGGTCGACG CCGACGGGGG CGGGCGGGTC ACCGAACTGG TGGCGCGTCC GCTGTTGAAC
ATGTATTGGC CTGACCTGGC CGGGTTCGTG CAGCCTCTGG CCGGGGAGTA CGCGGGGCGA
CGCGAGGTGT TGGAGAGCAT CCCCTTCGTC ACACACTATG GAGTCGAGGT CGCGCATTTG
ATCGACTTGC TGCGGTGGCG GGGGTTGGAG GCGTTCGCTC AGGTCGACCT CGGGATGCGC
ACCCACCGGC ATCAAAGCAC CCATGCGTTG GGGCAGATGG CCGGACAGAT CATGTTGACG
ATCATGGATC GGCTCGACCG CAGTGGCCGG CTGGTGGTGG CGGAGCCGCC GTCCGCGTTG
CTCGCGCAGT TCCGCCGCAG CGAGGCCGCC GATGGGGCGG TACGGGAGTG GGTGGTCACC
GATCTCACCG TGCGGGAGCG GCCTCCACTG CGCACGGTGC GTCCCACGGG GCGGAGTGGC
CCTCCGTGGT AG
|
|---|
| Protein sequence | MDTTRIGLSA DNADLGFSSR VRSWLRHRSA RADDWTASEL CALKGERTVT VVIPARDEER
TVGRIVKTIR TALMEEYPLV DDVLVVDSRS RDNTARVAAE AGARVVAQDT VLQPLPDMHG
KGEALWKGLA ATTGDLVVFV DGDLYDFTAE YVIGLLGPLL TDPGVDYVKG FYQRPLVHGS
QVDADGGGRV TELVARPLLN MYWPDLAGFV QPLAGEYAGR REVLESIPFV THYGVEVAHL
IDLLRWRGLE AFAQVDLGMR THRHQSTHAL GQMAGQIMLT IMDRLDRSGR LVVAEPPSAL
LAQFRRSEAA DGAVREWVVT DLTVRERPPL RTVRPTGRSG PPW
|
|---|
| |