Gene Svir_15790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_15790 
Symbol 
ID8386912 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1622659 
End bp1623570 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content66% 
IMG OID644975657 
Producthypothetical protein 
Protein accessionYP_003133441 
Protein GI257055609 
COG category[R] General function prediction only 
COG ID[COG1660] Predicted P-loop-containing kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.187917 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGAGG AGCACACCGA GAACGTTGGG GGAGCGGGCG CCAGGGGCTC CGGGATGGAG 
GTGGCGGTCG TCACCGGATT GTCCGGGGCG GGCCGCAGTA CCGCCGCCAA ATGCCTGGAG
GACCTGGGCT GGTTCGTCGT GGACAACCTG CCACCCGAGT TGATCTCCAC GATGGTGGAG
CTCGGCGCGC AGGCGCGGGG TGTGATCACC AAGGTGGCGG TCGTGATGGA CGTGCGGTCG
CGTGCCTTCA CCGATGACCT CGCCTCGGTC ATCAAGGACC TCGACGCGCG TGGCTACAAG
CCTCGGGTGC TGTTCCTGGA AGCCACCGAT TCGGTGCTGA TCCGTCGCTT CGACCAGGTG
CGTCGCGGCC ATCCCATGCA GGGGGACGGA AGGCTGGTCG ACGGCATCAC CGCCGAGCGG
AAGTTGCTGG CGCCGCTGCG GGAGGAAGCC GACCTGATAC TCGACACGTC GGCGCTGTCG
GTGCACGATC TTCGCGCCAA GATCGAGGAC GCGTTCGGCA CCGAGTCCAG TACTCAGACC
CGGGTCACGG TGTTGTCCTT CGGCTACAAG TACGGCTTGC CGATGGACTC CGACCTGGTG
ATGGACGTGC GTTTCCTGCC CAATCCGTTC TGGATCCCCG AATTGCGGGA CCAAAGCGGA
CTCGACGGCG ACGTGCGCAA CTACGTGTTG GGCCAGGAGG GCGCAGAGGA GTTCCTGCAG
CAGTACCACG AGTTGCTGCG TTTGGTGGGG GCCGGGTACA AGCGAGAGGG CAAGCGTTAC
CTCACCTTGG CCGTGGGCTG CACCGGTGGC AAGCACCGCA GTGTCGCCAT CTCCGAGGAG
CTGGCGAACC GGCTGTCCAA GGAGGACGGT ATGGCGGTCA AGGTCGTGCA CCGGGATCTG
GGCAGGGAGT GA
 
Protein sequence
MTEEHTENVG GAGARGSGME VAVVTGLSGA GRSTAAKCLE DLGWFVVDNL PPELISTMVE 
LGAQARGVIT KVAVVMDVRS RAFTDDLASV IKDLDARGYK PRVLFLEATD SVLIRRFDQV
RRGHPMQGDG RLVDGITAER KLLAPLREEA DLILDTSALS VHDLRAKIED AFGTESSTQT
RVTVLSFGYK YGLPMDSDLV MDVRFLPNPF WIPELRDQSG LDGDVRNYVL GQEGAEEFLQ
QYHELLRLVG AGYKREGKRY LTLAVGCTGG KHRSVAISEE LANRLSKEDG MAVKVVHRDL
GRE