Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_15720 |
Symbol | |
ID | 8386905 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 1615725 |
End bp | 1616351 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644975650 |
Product | riboflavin synthase, alpha subunit |
Protein accession | YP_003133434 |
Protein GI | 257055602 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0307] Riboflavin synthase alpha chain |
TIGRFAM ID | [TIGR00187] riboflavin synthase, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTTCACCG GGATTGTCGA GGAACTTGGC GAGGTCACGC GCGTGGAGCC GAACGCGGAG GCCACGCGGC TCACCGTGCG GGGTCCGGTG GTCACACAAG ACGCACGGCA CGGAGATTCG ATCGCGGTCA ACGGCGTGTG CTTGACCGTT GTGGACACCA CCGATGACGA GTTCACCGTC GATGTCGTCC CCGAGACGTT GCAGCGCACC AGCTTGAACG GCATCGAACC CGGCCGGTTG GTCAACCTGG AGCGGGCGAT GAGTGCCGAC GGTCGGTTCG GCGGCCACGT CGTACAGGGT CATGTCGACG GCACCGGGAC TTTCCTGTCG CGCGACCACG ACGGGCTCGC TCACTTCGCG TACCCGCCGT CACTGTCCCG ATACCTGGTG GAGAAGGGCT CCATCGCCGT GGACGGTGTC TCGCTGACGG TGGCACGGGT GACGGATCAG GAGTTCGCAG TCGCGTTGAT CCCCACCACG TTGCGTGCGA CCACCCTGGG TCGCAACCAA CCGGGCGACT CGGTGAATCT GGAAGTGGAC GTGCTGGCGA AGTACGTCGA GAAGCTGGCC GCTGTCCACC TGACGAGGTC ATCGGTGGAG GACGGCGGGG GCGAGGAGGA CAGGTGA
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Protein sequence | MFTGIVEELG EVTRVEPNAE ATRLTVRGPV VTQDARHGDS IAVNGVCLTV VDTTDDEFTV DVVPETLQRT SLNGIEPGRL VNLERAMSAD GRFGGHVVQG HVDGTGTFLS RDHDGLAHFA YPPSLSRYLV EKGSIAVDGV SLTVARVTDQ EFAVALIPTT LRATTLGRNQ PGDSVNLEVD VLAKYVEKLA AVHLTRSSVE DGGGEEDR
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