Gene Svir_15720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_15720 
Symbol 
ID8386905 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1615725 
End bp1616351 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content66% 
IMG OID644975650 
Productriboflavin synthase, alpha subunit 
Protein accessionYP_003133434 
Protein GI257055602 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0307] Riboflavin synthase alpha chain 
TIGRFAM ID[TIGR00187] riboflavin synthase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTCACCG GGATTGTCGA GGAACTTGGC GAGGTCACGC GCGTGGAGCC GAACGCGGAG 
GCCACGCGGC TCACCGTGCG GGGTCCGGTG GTCACACAAG ACGCACGGCA CGGAGATTCG
ATCGCGGTCA ACGGCGTGTG CTTGACCGTT GTGGACACCA CCGATGACGA GTTCACCGTC
GATGTCGTCC CCGAGACGTT GCAGCGCACC AGCTTGAACG GCATCGAACC CGGCCGGTTG
GTCAACCTGG AGCGGGCGAT GAGTGCCGAC GGTCGGTTCG GCGGCCACGT CGTACAGGGT
CATGTCGACG GCACCGGGAC TTTCCTGTCG CGCGACCACG ACGGGCTCGC TCACTTCGCG
TACCCGCCGT CACTGTCCCG ATACCTGGTG GAGAAGGGCT CCATCGCCGT GGACGGTGTC
TCGCTGACGG TGGCACGGGT GACGGATCAG GAGTTCGCAG TCGCGTTGAT CCCCACCACG
TTGCGTGCGA CCACCCTGGG TCGCAACCAA CCGGGCGACT CGGTGAATCT GGAAGTGGAC
GTGCTGGCGA AGTACGTCGA GAAGCTGGCC GCTGTCCACC TGACGAGGTC ATCGGTGGAG
GACGGCGGGG GCGAGGAGGA CAGGTGA
 
Protein sequence
MFTGIVEELG EVTRVEPNAE ATRLTVRGPV VTQDARHGDS IAVNGVCLTV VDTTDDEFTV 
DVVPETLQRT SLNGIEPGRL VNLERAMSAD GRFGGHVVQG HVDGTGTFLS RDHDGLAHFA
YPPSLSRYLV EKGSIAVDGV SLTVARVTDQ EFAVALIPTT LRATTLGRNQ PGDSVNLEVD
VLAKYVEKLA AVHLTRSSVE DGGGEEDR