Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_15680 |
Symbol | |
ID | 8386901 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 1611553 |
End bp | 1612476 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644975646 |
Product | methionyl-tRNA formyltransferase |
Protein accession | YP_003133430 |
Protein GI | 257055598 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0223] Methionyl-tRNA formyltransferase |
TIGRFAM ID | [TIGR00460] methionyl-tRNA formyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.153254 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTTCGCGG GGACACCCGC GCCTGCTGTG CCGTCGTTGC GTGCGTTGCT CGATTCGCCC CGGCACGAGG TCGTCGCCGT CGTGACCCGG CCCGATGCCC CGGCCGGGCG GGGGCGGAAG CTGTCGCGTT CGCCCGTCGG CGAGCTCGCC GACGAGCACG GCATCGAAGT GCTCACCCCA CGGCGTGCCG GGGACGAGGA CTTCCTGGCG CGACTGTCCG AACTCGCGCC CGACGCCTGC CCTGTGGTCG CCTACGGCGC CCTGTTGCCA CGGTCGGCGC TCGCGGTGCC GCGGCATGGC TGGATCAATC TGCATTTCTC GCTGTTGCCC GCATGGCGGG GAGCCGCCCC GGTGCAGGCG GCGATCAAAG CGGGGGACGA GATCACCGGA GCTTCGACGT TCCGTATCGT GCCGGAGCTG GACGCCGGAC CGGTGTACGG CACCGTCACC GAGCGGATCA GACCGACCGA CACCGCCGGG GAACTGTTGG ACCGGCTCGC GAAATCAGGG GCCGAACTCC TTCTGTCTAC TTTAGATGGT ATTGAGGACG GTACCGTCCA GGCTGTTCCC CAGCCTGCCG ACGGTGTGAC GTACGCGCCC AAGGTGACTG TGGACGATGC CCGGGTGAAT TTCGCCGAAC CGGCGCTGGC GGTGGATCGG CACATCCGCT CGGTCACCCC CGAGCCCGGT GCCTGGGCGG AGTTTCGGGG GCAGCGGCTC AAACTCGGAC CCGTCAGGCT CGGTGACGGG GAGTACGAGG GGCTCGCGCC GGGCGAGTTG GTGGTGGAAC GCAGACGGGT ACTCGTCGGC ACCGCGACGA CGCCCGTCGT GCTGGGCGAG GTGCAAGCGC AAGGAAAGAA GCGCATGGCC GCCACCGACT GGGCACGCGG CACACGGATC GAGCAGGGGG AACGTCTGAC ATGA
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Protein sequence | MFAGTPAPAV PSLRALLDSP RHEVVAVVTR PDAPAGRGRK LSRSPVGELA DEHGIEVLTP RRAGDEDFLA RLSELAPDAC PVVAYGALLP RSALAVPRHG WINLHFSLLP AWRGAAPVQA AIKAGDEITG ASTFRIVPEL DAGPVYGTVT ERIRPTDTAG ELLDRLAKSG AELLLSTLDG IEDGTVQAVP QPADGVTYAP KVTVDDARVN FAEPALAVDR HIRSVTPEPG AWAEFRGQRL KLGPVRLGDG EYEGLAPGEL VVERRRVLVG TATTPVVLGE VQAQGKKRMA ATDWARGTRI EQGERLT
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